Bradyrhizobium sp. SK17

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. SK17 is a rod-shaped bacterium that possesses flagella, which likely contribute to its motility. This microorganism has been characterized by a unique genomic structure, containing two replicons. These features are significant as they may play a role in its adaptability and interaction with various environments. Bradyrhizobium sp. SK17 is known to associate with Citrus hosts, indicating its potential importance in agricultural ecosystems, particularly concerning the cultivation of citrus crops. The ability of this bacterium to form symbiotic relationships with plants can enhance nutrient uptake, particularly nitrogen, which is essential for plant growth. This symbiosis is particularly beneficial in nutrient-poor soils, where the presence of Bradyrhizobium sp. SK17 may improve soil fertility and plant health. The genomic accessions NZ_CP025114.1 and NZ_CP025113.1 provide a basis for further research into the genetic makeup of Bradyrhizobium sp. SK17, which could unveil more about its functional capabilities and ecological roles. Understanding these traits can inform agricultural practices and sustainability efforts, especially in citrus production, where the management of beneficial microbial communities can lead to improved crop resilience and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. SK17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Citrus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete

Gene Summary

Adenine Count

55614 bp

Thymine Count

56264 bp

Guanine Count

86950 bp

Cytosine Count

86650 bp

Genome Length

285478 bp

Protein-coding Genes

298 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseCWS35_RS38590Not AvailableNegative258308 - 25948043113.9
hypothetical proteinCWS35_RS38595Not AvailableNegative259494 - 26058240824.4
type ii toxin-antitoxin system vapc family toxinCWS35_RS38600Not AvailableNegative260579 - 26101615818.9
organomercurial lyaseCWS35_RS38605Not AvailableNegative261013 - 26129010151.2
prevent-host-death proteinCWS35_RS38610Not AvailablePositive261398 - 26170311105.7
rhe_pe00001 family proteinCWS35_RS38615Not AvailablePositive261937 - 26315444794.0
aaa family atpaseCWS35_RS38620Not AvailablePositive263265 - 26425437285.1
s8 family peptidaseCWS35_RS38625Not AvailablePositive264262 - 26660185950.3
hypothetical proteinCWS35_RS39370Not AvailableNegative266627 - 26703715519.6
pd-(d/e)xk nuclease family proteinCWS35_RS38635Not AvailablePositive268924 - 26942418443.8

Displaying genes 271 – 280 of 7808 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.