Rahnella sp. AA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella sp. AA is a Gram-negative bacterium characterized by possessing a single replicon. The genomic data for this organism is recorded under the accession number PITQ00000000.1. As a member of the broader Rahnella genus, this bacterium may contribute to various ecological niches, potentially influencing soil health or plant interactions. The Gram-negative status suggests that Rahnella sp. AA has a thin peptidoglycan layer and an outer membrane that could play a role in its environmental resilience and interactions with other microbial communities. The presence of a single replicon may indicate a streamlined genomic organization, which can affect its adaptability and evolutionary dynamics. This trait could reflect a specialization to specific ecological roles, allowing it to thrive in particular environments. Understanding these characteristics of Rahnella sp. AA provides insight into its potential ecological functions and interactions within microbial communities. Further studies could elucidate its specific roles and contributions to ecosystem processes, particularly in relation to nutrient cycling and plant-microbe interactions, where many members of the Rahnella genus are often found.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella sp. AA
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella sp. AA NODE_36_length_1066_cov_250.001, whole genome

Gene Summary

Adenine Count

1395283 bp

Thymine Count

1395171 bp

Guanine Count

1518180 bp

Cytosine Count

1545819 bp

Genome Length

5854747 bp

Protein-coding Genes

5141 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp endopeptidase, proteolytic subunit clppCWS43_03745Not AvailablePositive833208 - 83383123195.1
atp-dependent protease atp-binding subunit clpxCWS43_03750Not AvailablePositive834035 - 83530946459.9
endopeptidase laCWS43_03755Not AvailablePositive835501 - 83785587380.4
dna-binding protein hu-betaCWS43_03760Not AvailablePositive838072 - 8383479269.13
peptidylprolyl isomeraseCWS43_03765Not AvailablePositive838513 - 84039368279.3
competence protein comeaCWS43_03770Not AvailablePositive840532 - 84091513291.2
thioesteraseCWS43_03775Not AvailablePositive841034 - 84143515430.5
7-cyano-7-deazaguanine synthase quecCWS43_03780Not AvailableNegative841505 - 84220325490.3
peptide abc transporter substrate-binding proteinCWS43_03785Not AvailableNegative842301 - 84401365683.7
hmp-pp phosphataseCWS43_03790Not AvailablePositive844206 - 84502730302.3

Displaying genes 871 – 880 of 5316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.