Rahnella sp. AA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella sp. AA is a Gram-negative bacterium characterized by possessing a single replicon. The genomic data for this organism is recorded under the accession number PITQ00000000.1. As a member of the broader Rahnella genus, this bacterium may contribute to various ecological niches, potentially influencing soil health or plant interactions. The Gram-negative status suggests that Rahnella sp. AA has a thin peptidoglycan layer and an outer membrane that could play a role in its environmental resilience and interactions with other microbial communities. The presence of a single replicon may indicate a streamlined genomic organization, which can affect its adaptability and evolutionary dynamics. This trait could reflect a specialization to specific ecological roles, allowing it to thrive in particular environments. Understanding these characteristics of Rahnella sp. AA provides insight into its potential ecological functions and interactions within microbial communities. Further studies could elucidate its specific roles and contributions to ecosystem processes, particularly in relation to nutrient cycling and plant-microbe interactions, where many members of the Rahnella genus are often found.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella sp. AA
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella sp. AA NODE_36_length_1066_cov_250.001, whole genome

Gene Summary

Adenine Count

1395283 bp

Thymine Count

1395171 bp

Guanine Count

1518180 bp

Cytosine Count

1545819 bp

Genome Length

5854747 bp

Protein-coding Genes

5141 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenase pdxaCWS43_01715Not AvailableNegative381779 - 38278635736.2
peptidylprolyl isomerase suraCWS43_01720Not AvailableNegative382776 - 38407147427.4
lps assembly protein lptdCWS43_01725Not AvailableNegative384176 - 38655189543.7
co-chaperone djlaCWS43_01730Not AvailablePositive386733 - 38755431017.5
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaCWS43_01735Not AvailableNegative387617 - 38831826811.1
rna polymerase-associated protein rapaCWS43_01740Not AvailableNegative388387 - 391284109378.0
dna polymerase iiCWS43_01745Not AvailableNegative391508 - 39387190261.5
hypothetical proteinCWS43_01750Not AvailablePositive394157 - 39492428223.5
thiamine abc transporter atp-binding proteinCWS43_01755Not AvailableNegative394914 - 39562125648.4
thiamine/thiamine pyrophosphate abc transporter permease thipCWS43_01760Not AvailableNegative395605 - 39721559579.5

Displaying genes 471 – 480 of 5316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.