Subtercola vilae str. DB165

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Subtercola

Description

Subtercola vilae strain DB165 is characterized by having a single replicon, which indicates its genetic organization is relatively simple compared to other bacteria that may possess multiple replicons. The strain is cataloged under the accession number QYRT00000000.1, which serves as a unique identifier in genetic databases for researchers studying this specific organism. The singular replicon may offer insights into the strain's genetic stability and adaptability, as bacteria with fewer replicons often exhibit streamlined metabolic processes. This can be advantageous for survival in specific ecological niches. Although detailed ecological or environmental contexts for Subtercola vilae strain DB165 are not provided, its genetic simplicity could suggest a specialization that allows it to thrive in particular habitats. In summary, Subtercola vilae strain DB165 features a single replicon and is referenced by the accession QYRT00000000.1. Its genetic structure may reflect an adaptation to specific environments, highlighting the potential for specialized ecological roles within microbial communities. Further research would be essential to elucidate its ecological impact and biological functions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusSubtercola
SpeciesSubtercola vilae
StrainDB165

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subtercola vilae strain DB165 Svilae_103, whole genome shotgun

Gene Summary

Adenine Count

704435 bp

Thymine Count

705992 bp

Guanine Count

1319970 bp

Cytosine Count

1312738 bp

Genome Length

4043135 bp

Protein-coding Genes

3629 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar epimeraseD4765_02230Not AvailablePositive470567 - 47148432724.2
inositol 2-dehydrogenaseD4765_02235Not AvailablePositive471510 - 47252035096.4
hydroxypyruvate isomeraseD4765_02240Not AvailablePositive472517 - 47329027518.6
gfo/idh/moca family oxidoreductaseD4765_02245Not AvailableNegative473283 - 47449443061.0
sugar abc transporter substrate-binding proteinD4765_02250Not AvailablePositive474751 - 47571632653.3
abc transporter permeaseD4765_02255Not AvailablePositive475786 - 47683236709.8
sugar abc transporter atp-binding proteinD4765_02260Not AvailablePositive476829 - 47763828658.8
carbohydrate-binding proteinD4765_02265Not AvailablePositive477880 - 481302118255.0
rok family transcriptional regulatorD4765_02270Not AvailableNegative481442 - 48265342847.6
extracellular solute-binding proteinD4765_02275Not AvailablePositive482836 - 48417947617.8

Displaying genes 501 – 510 of 3719 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.