Algoriphagus lacus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus lacus is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, which is significant as it indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The genetic information for Algoriphagus lacus can be accessed through the accession number QXML00000000.1, which provides a reference point for further studies and comparisons with related taxa. As a member of the Algoriphagus genus, Algoriphagus lacus is likely to play a role in aquatic ecosystems, given the genus's association with freshwater environments. The characteristics of being Gram-negative and rod-shaped are typical of many bacteria found in these habitats, suggesting that Algoriphagus lacus may contribute to the microbial diversity and ecological functions within its niche. Understanding the traits of Algoriphagus lacus can offer insights into its ecological role, particularly in nutrient cycling and interactions with other microorganisms. The presence of a single replicon may also allow for efficient replication and adaptation, which could be advantageous in fluctuating environmental conditions. Overall, the traits of Algoriphagus lacus highlight its potential importance in aquatic microbiomes, underscoring the need for further research to elucidate its specific functions and interactions in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus lacus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus lacus strain N3 N3_scaffold45, whole genome shotgun

Gene Summary

Adenine Count

1301679 bp

Thymine Count

1334595 bp

Guanine Count

1055152 bp

Cytosine Count

1009786 bp

Genome Length

4701328 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s9 family peptidaseD0X99_02790Not AvailableNegative665018 - 66720481845.0
d-alanine--d-alanine ligaseD0X99_02795Not AvailablePositive667333 - 66831936623.1
aquaporin family proteinD0X99_02800Not AvailableNegative668431 - 66916525262.4
glycerol kinaseD0X99_02805Not AvailableNegative669255 - 67075455566.4
glycerol-3-phosphate dehydrogenase/oxidaseD0X99_02810Not AvailableNegative670751 - 67232557846.8
histidine phosphatase family proteinD0X99_02815Not AvailableNegative672385 - 67288218338.8
rlua family pseudouridine synthaseD0X99_02820Not AvailableNegative672989 - 67372328426.3
gnat family n-acetyltransferaseD0X99_02825Not AvailableNegative673795 - 67427418294.0
type iii pantothenate kinaseD0X99_02830Not AvailablePositive674348 - 67512728263.3
quinone-dependent dihydroorotate dehydrogenaseD0X99_02835Not AvailablePositive675211 - 67625137893.2

Displaying genes 561 – 570 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.