Algoriphagus lacus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus lacus is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, which is significant as it indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The genetic information for Algoriphagus lacus can be accessed through the accession number QXML00000000.1, which provides a reference point for further studies and comparisons with related taxa. As a member of the Algoriphagus genus, Algoriphagus lacus is likely to play a role in aquatic ecosystems, given the genus's association with freshwater environments. The characteristics of being Gram-negative and rod-shaped are typical of many bacteria found in these habitats, suggesting that Algoriphagus lacus may contribute to the microbial diversity and ecological functions within its niche. Understanding the traits of Algoriphagus lacus can offer insights into its ecological role, particularly in nutrient cycling and interactions with other microorganisms. The presence of a single replicon may also allow for efficient replication and adaptation, which could be advantageous in fluctuating environmental conditions. Overall, the traits of Algoriphagus lacus highlight its potential importance in aquatic microbiomes, underscoring the need for further research to elucidate its specific functions and interactions in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus lacus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus lacus strain N3 N3_scaffold45, whole genome shotgun

Gene Summary

Adenine Count

1301679 bp

Thymine Count

1334595 bp

Guanine Count

1055152 bp

Cytosine Count

1009786 bp

Genome Length

4701328 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinD0X99_01945Not AvailablePositive479514 - 48045836394.2
aminopeptidase p family proteinD0X99_01950Not AvailablePositive480500 - 48177446000.3
excinuclease abc subunit uvraD0X99_01955Not AvailablePositive481883 - 484714105269.0
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive482138 - 482224Not Available
histidine kinaseD0X99_01960Not AvailablePositive484798 - 48585040346.5
response regulatorD0X99_01965Not AvailablePositive485865 - 48659928220.0
dna-binding response regulatorD0X99_01970Not AvailablePositive486725 - 48748028640.7
hypothetical proteinD0X99_01975Not AvailablePositive487794 - 4880128523.47
phoh family proteinD0X99_01980Not AvailableNegative488035 - 48938151480.1
dead/deah box helicaseD0X99_01985Not AvailableNegative489598 - 492534113195.0

Displaying genes 391 – 400 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.