Algoriphagus lacus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus lacus is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, which is significant as it indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The genetic information for Algoriphagus lacus can be accessed through the accession number QXML00000000.1, which provides a reference point for further studies and comparisons with related taxa. As a member of the Algoriphagus genus, Algoriphagus lacus is likely to play a role in aquatic ecosystems, given the genus's association with freshwater environments. The characteristics of being Gram-negative and rod-shaped are typical of many bacteria found in these habitats, suggesting that Algoriphagus lacus may contribute to the microbial diversity and ecological functions within its niche. Understanding the traits of Algoriphagus lacus can offer insights into its ecological role, particularly in nutrient cycling and interactions with other microorganisms. The presence of a single replicon may also allow for efficient replication and adaptation, which could be advantageous in fluctuating environmental conditions. Overall, the traits of Algoriphagus lacus highlight its potential importance in aquatic microbiomes, underscoring the need for further research to elucidate its specific functions and interactions in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus lacus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus lacus strain N3 N3_scaffold45, whole genome shotgun

Gene Summary

Adenine Count

1301679 bp

Thymine Count

1334595 bp

Guanine Count

1055152 bp

Cytosine Count

1009786 bp

Genome Length

4701328 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yebc/pmpr family dna-binding transcriptional regulatorD0X99_00090Not AvailablePositive20760 - 2146726746.5
non-canonical purine ntp phosphataseD0X99_00095Not AvailablePositive21488 - 2205420775.7
ntpaseD0X99_00100Not AvailableNegative22255 - 2324136267.3
peptidase m20D0X99_00105Not AvailablePositive23311 - 2425835361.9
chloride channel proteinD0X99_00110Not AvailablePositive24304 - 2608265380.1
monofunctional biosynthetic peptidoglycan transglycosylaseD0X99_00115Not AvailableNegative26503 - 2719826895.1
duf3857 domain-containing proteinD0X99_00120Not AvailableNegative27325 - 2928073719.2
duf3857 domain-containing proteinD0X99_00125Not AvailableNegative29273 - 3113570248.0
maoc family dehydrataseD0X99_00130Not AvailablePositive31332 - 3179617493.0
trna threonylcarbamoyladenosine dehydrataseD0X99_00135Not AvailableNegative31797 - 3252226572.3

Displaying genes 21 – 30 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.