Synechococcus sp. BS56D

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. BS56D is a Gram-negative cyanobacterium characterized by the presence of flagella, which may contribute to its motility in aquatic environments. It possesses a single replicon, indicating a streamlined genetic organization that can be advantageous for cellular efficiency and adaptation. The accession number for Synechococcus sp. BS56D is PHQU00000000.1, which can be used for further genomic studies or comparisons with related taxa. As a member of the cyanobacterial group, it plays a significant role in primary production and nutrient cycling in marine ecosystems, contributing to the overall health of aquatic environments. Cyanobacteria, including Synechococcus species, are known for their ability to perform photosynthesis, often in diverse and challenging habitats. The presence of flagella in Synechococcus sp. BS56D might suggest that it can navigate towards favorable light conditions or nutrient sources, enhancing its ecological role in these environments. This motility could be particularly beneficial in competitive microbial communities, allowing it to optimize resource acquisition and maintain its ecological niche. In summary, Synechococcus sp. BS56D's Gram-negative nature, flagella presence, and unique genetic characteristics underscore its potential significance in aquatic ecosystems, particularly in terms of its adaptability and contributions to primary productivity.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. BS56D
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. BS56D
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. BS56D BS56D-spades-C152, whole genome shotgun

Gene Summary

Adenine Count

444781 bp

Thymine Count

448465 bp

Guanine Count

706736 bp

Cytosine Count

703841 bp

Genome Length

2303823 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secfCWE17_05940Not AvailableNegative1109414 - 111037934200.1
protein translocase subunit secdCWE17_05945Not AvailableNegative1110383 - 111187052525.0
alpha-ketoacid dehydrogenase subunit betaCWE17_05950Not AvailableNegative1111874 - 111285735888.4
duf3082 domain-containing proteinCWE17_05955Not AvailableNegative1113058 - 111336911144.7
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseCWE17_05960Not AvailableNegative1113366 - 111429833110.7
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseCWE17_05965Not AvailableNegative1114295 - 111513730924.5
hypothetical proteinCWE17_05970Not AvailableNegative1115134 - 111555015523.9
pentapeptide repeat-containing proteinCWE17_05975Not AvailablePositive1115773 - 111625516886.2
hypothetical proteinCWE17_05980Not AvailablePositive1116255 - 111667415681.5
50s rrna methyltransferaseCWE17_05985Not AvailablePositive1116671 - 111710516073.6

Displaying genes 1181 – 1190 of 2379 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.