Pseudomonas sp. WCS365

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. WCS365 is a notable bacterium primarily associated with the plant Arabidopsis thaliana. This organism is characterized by having a single replicon, which is significant for its genetic stability and replication processes. The specific accession for this strain is PHHS00000000.1, indicating its cataloging in genomic databases for further research and analysis. Pseudomonas sp. WCS365 is part of a diverse genus known for its ecological versatility and ability to thrive in various environments. It has been studied for its interactions with plant hosts, particularly in promoting plant growth and health. The relationship between Pseudomonas sp. WCS365 and Arabidopsis thaliana may involve various mechanisms, including the enhancement of nutrient availability, protection against pathogens, and stimulation of plant defense responses. Ecologically, Pseudomonas sp. WCS365 contributes to the microbiome associated with Arabidopsis thaliana, playing a role in the plant's resilience and adaptation to its environment. This interaction highlights the importance of beneficial microorganisms in agricultural systems and their potential to improve plant performance. Understanding such relationships can lead to advancements in sustainable agricultural practices and biocontrol strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. WCS365
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. WCS365
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. WCS365 WCS365_contig65, whole genome shotgun

Gene Summary

Adenine Count

1290069 bp

Thymine Count

1270294 bp

Guanine Count

1980076 bp

Cytosine Count

2019364 bp

Genome Length

6559803 bp

Protein-coding Genes

5800 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Gpo family capsid scaffolding proteinCVG87_12555Not AvailablePositive2736301 - 273713130555.8
Capsid proteinCVG87_12560Not AvailablePositive2737151 - 273815837514.5
Terminase endonuclease subunitCVG87_12565Not AvailablePositive2738169 - 273886725361.5
Head completion/stabilization proteinCVG87_12570Not AvailablePositive2738972 - 273943316838.8
Tail protein xCVG87_12575Not AvailablePositive2739433 - 27396457712.19
Tail proteinCVG87_12580Not AvailablePositive2739670 - 274014617577.0
Virion morphogenesis proteinCVG87_12585Not AvailablePositive2740143 - 274059817551.3
hypothetical proteinCVG87_12590Not AvailablePositive2740799 - 274222352790.1
hypothetical proteinCVG87_12595Not AvailablePositive2743034 - 274406239731.0
Baseplate assembly protein vCVG87_12600Not AvailablePositive2744150 - 274472220278.4

Displaying genes 11 – 20 of 5935 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.