Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sp. OPT22 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1339375 bp
Thymine Count
1332450 bp
Guanine Count
859368 bp
Cytosine Count
892202 bp
Genome Length
4425146 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | SOPP22_14080 | Not Available | Negative | 3214665 - 3215357 | 24620.8 |
| lipopolysaccharide assembly protein lapb | SOPP22_14085 | Not Available | Negative | 3215397 - 3216557 | 44070.1 |
| duf1049 domain-containing protein | SOPP22_14090 | Not Available | Negative | 3216559 - 3216834 | 10269.9 |
| integration host factor subunit beta | SOPP22_14095 | Not Available | Negative | 3217128 - 3217415 | 10628.8 |
| 30s ribosomal protein s1 | SOPP22_14100 | Not Available | Negative | 3217482 - 3219149 | 61092.1 |
| (d)cmp kinase | SOPP22_14105 | Not Available | Negative | 3219258 - 3219944 | 25039.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SOPP22_14110 | Not Available | Negative | 3220123 - 3221412 | 46158.4 |
| aromatic amino acid aminotransferase | SOPP22_14115 | Not Available | Positive | 3221627 - 3222817 | 43945.4 |
| methyltransferase | SOPP22_14120 | Not Available | Positive | 3222871 - 3223566 | 26541.4 |
| mate family efflux transporter | SOPP22_14125 | Not Available | Positive | 3223666 - 3225018 | 50081.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

