Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sp. OPT22 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1339375 bp
Thymine Count
1332450 bp
Guanine Count
859368 bp
Cytosine Count
892202 bp
Genome Length
4425146 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | SOPP22_13415 | Not Available | Positive | 3064224 - 3065609 | 51045.1 |
| hcp1 family type vi secretion system effector | SOPP22_13420 | Not Available | Positive | 3065643 - 3066161 | 18371.6 |
| type vi secretion system contractile sheath small subunit | SOPP22_13425 | Not Available | Positive | 3066231 - 3066740 | 19012.4 |
| type vi secretion system contractile sheath large subunit | SOPP22_13430 | Not Available | Positive | 3066740 - 3068221 | 54375.5 |
| type vi secretion system contractile sheath large subunit | SOPP22_13435 | Not Available | Positive | 3068282 - 3069649 | 52433.4 |
| type vi secretion system baseplate subunit tsse | SOPP22_13440 | Not Available | Positive | 3069646 - 3070068 | 15811.7 |
| type vi secretion system baseplate subunit tssf | SOPP22_13445 | Not Available | Positive | 3070061 - 3071842 | 67279.5 |
| type vi secretion protein vasb-1 | SOPP22_13450 | Not Available | Positive | 3071824 - 3072807 | 37000.5 |
| type vi secretion system atpase tssh | SOPP22_13455 | Not Available | Positive | 3072817 - 3075423 | 96106.0 |
| hypothetical protein | SOPP22_13460 | Not Available | Positive | 3075482 - 3076498 | 38131.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

