Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sp. OPT22 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1339375 bp
Thymine Count
1332450 bp
Guanine Count
859368 bp
Cytosine Count
892202 bp
Genome Length
4425146 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 127269 - 127366 | Not Available |
| methionyl-trna formyltransferase | SOPP22_00500 | Not Available | Negative | 126875 - 127849 | 35569.5 |
| peptide deformylase | SOPP22_00505 | Not Available | Negative | 127885 - 128400 | 19612.5 |
| peptidoglycan-binding protein lysm | SOPP22_00510 | Not Available | Positive | 128590 - 129708 | 41966.4 |
| dna-protecting protein dpra | SOPP22_00515 | Not Available | Positive | 129792 - 130820 | 37370.6 |
| hypothetical protein | SOPP22_00520 | Not Available | Positive | 130824 - 131297 | 18726.3 |
| d-alanyl-d-alanine dipeptidase | SOPP22_00525 | Not Available | Positive | 131368 - 131946 | 21878.0 |
| collagenase | SOPP22_00530 | Not Available | Negative | 131977 - 133743 | 67201.1 |
| hypothetical protein | SOPP22_00535 | Not Available | Positive | 133883 - 134446 | 21125.2 |
| threonylcarbamoyl-amp synthase | SOPP22_00540 | Not Available | Positive | 134464 - 135021 | 20218.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

