Denitrovibrio sp.

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Deferribacterota

Class

Deferribacteres

Order

Deferribacterales

Family

Geovibrionaceae

Genus

Denitrovibrio

Description

Denitrovibrio sp. is a Gram-negative bacterium characterized by its bacilli shape and presence of flagella, indicating motility. It possesses a single replicon, which is a feature that may impact its genetic stability and replication process. The accession number for Denitrovibrio sp. is PKTM00000000.1, which provides a reference for specific genetic information related to this microorganism. Given its classification as a denitrifying bacterium, Denitrovibrio sp. likely plays a crucial role in nitrogen cycling within its ecological niche. Denitrifying bacteria are known for their ability to convert nitrates into nitrogen gas, thereby reducing nitrogen compounds in the environment. This process can significantly influence soil health and ecosystem dynamics, particularly in agricultural contexts where nitrogen management is essential for crop production. Overall, Denitrovibrio sp. exemplifies the functional diversity found within the bacterial domain, particularly in its contributions to ecological processes such as denitrification, which can help mitigate issues related to nitrogen overload in various environments.

Taxonomy

KingdomPseudomonadati
PhylumDeferribacterota
ClassDeferribacteres
OrderDeferribacterales
FamilyGeovibrionaceae
GenusDenitrovibrio
SpeciesDenitrovibrio sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Denitrovibrio sp.
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Denitrovibrio sp. isolate BM701 sc_764, whole genome shotgun

Gene Summary

Adenine Count

854367 bp

Thymine Count

841748 bp

Guanine Count

597105 bp

Cytosine Count

584742 bp

Genome Length

2878086 bp

Protein-coding Genes

2629 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypotheticalC0602_01660Not AvailablePositive310730 - 31183339654.6
hydrogenase 2 large subunitC0602_01665Not AvailablePositive311836 - 31353662669.8
hydrogenase expression proteinC0602_01670Not AvailablePositive313628 - 31410117340.1
hypothetical proteinC0602_01675Not AvailablePositive314160 - 31558453631.8
diaminopimelate decarboxylaseC0602_01680Not AvailablePositive315661 - 31692046276.6
diaminopimelate epimeraseC0602_01685Not AvailablePositive316973 - 31778529701.5
4-hydroxy-tetrahydrodipicolinate synthaseC0602_01690Not AvailablePositive317814 - 31868631549.1
4-hydroxy-tetrahydrodipicolinate reductaseC0602_01695Not AvailablePositive318683 - 31948928963.2
prepilin-type cleavage/methylation domain-containing proteinC0602_01700Not AvailablePositive319904 - 32049420657.2
formyl transferaseC0602_01705Not AvailableNegative320645 - 32149632153.1

Displaying genes 341 – 350 of 1843 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.