Bifidobacterium callitrichidarum str. TRI 5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium callitrichidarum strain TRI 5 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species is part of the Bifidobacterium genus, known for its role in the gut microbiota of various hosts, including humans and other mammals. The strain TRI 5 possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data accessible under the accession number QFFM00000000.1 provides a reference for researchers interested in studying the genetic makeup and functional potential of this bacterium. In ecological terms, Bifidobacterium species are often associated with beneficial effects on host health, particularly in the context of gut microbiome composition. Their presence is linked to various health benefits, including the maintenance of gut barrier function and modulation of immune responses. Understanding the specific traits of Bifidobacterium callitrichidarum TRI 5 could shed light on its ecological roles and potential applications in probiotics or gut health therapies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium callitrichidarum
StrainTRI 5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c81, whole

Gene Summary

Adenine Count

590660 bp

Thymine Count

601184 bp

Guanine Count

964531 bp

Cytosine Count

964333 bp

Genome Length

3121265 bp

Protein-coding Genes

2434 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter substrate-binding proteinDF196_12340Not AvailableNegative2940792 - 294188038011.8
ribonucleoside hydrolase rihcDF196_12345Not AvailableNegative2942250 - 294329636953.8
coa-binding proteinDF196_12350Not AvailableNegative2943313 - 294390321500.8
bifunctional o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthaseDF196_12355Not AvailableNegative2943900 - 294524347829.2
cupin domain-containing proteinDF196_12360Not AvailablePositive2945545 - 294604519005.2
duf2207 domain-containing proteinDF196_12365Not AvailableNegative2946250 - 294856583182.3
hypothetical proteinDF196_12370Not AvailableNegative2948633 - 294920520943.2
polyribonucleotide nucleotidyltransferaseDF196_12375Not AvailableNegative2949561 - 2952347103538.0
30s ribosomal protein s15DF196_12385Not AvailableNegative2952659 - 295292810500.7
hypothetical proteinDF196_12390Not AvailableNegative2953085 - 295376524076.8

Displaying genes 2381 – 2390 of 2530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.