Bifidobacterium callitrichidarum str. TRI 5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium callitrichidarum strain TRI 5 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species is part of the Bifidobacterium genus, known for its role in the gut microbiota of various hosts, including humans and other mammals. The strain TRI 5 possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data accessible under the accession number QFFM00000000.1 provides a reference for researchers interested in studying the genetic makeup and functional potential of this bacterium. In ecological terms, Bifidobacterium species are often associated with beneficial effects on host health, particularly in the context of gut microbiome composition. Their presence is linked to various health benefits, including the maintenance of gut barrier function and modulation of immune responses. Understanding the specific traits of Bifidobacterium callitrichidarum TRI 5 could shed light on its ecological roles and potential applications in probiotics or gut health therapies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium callitrichidarum
StrainTRI 5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c81, whole

Gene Summary

Adenine Count

590660 bp

Thymine Count

601184 bp

Guanine Count

964531 bp

Cytosine Count

964333 bp

Genome Length

3121265 bp

Protein-coding Genes

2434 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate ammonia-lyaseDF196_11625Not AvailablePositive2780320 - 278175351318.6
transporterDF196_11630Not AvailablePositive2782001 - 278279828039.2
cpbp family intramembrane metalloprotease domain-containing proteinDF196_11635Not AvailableNegative2782853 - 278395641309.7
abc transporter atp-binding proteinDF196_11640Not AvailableNegative2784123 - 278536444418.8
abc transporter permeaseDF196_11645Not AvailableNegative2785371 - 278623731375.7
abc transporter permeaseDF196_11650Not AvailableNegative2786264 - 278719032608.4
abc transporter substrate-binding proteinDF196_11655Not AvailableNegative2787241 - 278841342102.1
d-alanine--d-alanine ligase aDF196_11660Not AvailableNegative2788807 - 278999442340.1
glycerol-3-phosphate acyltransferaseDF196_11665Not AvailableNegative2790096 - 279109734646.6
1-acyl-sn-glycerol-3-phosphate acyltransferaseDF196_11670Not AvailableNegative2791374 - 279229134413.5

Displaying genes 2241 – 2250 of 2530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.