Bifidobacterium callitrichidarum str. TRI 5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium callitrichidarum strain TRI 5 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species is part of the Bifidobacterium genus, known for its role in the gut microbiota of various hosts, including humans and other mammals. The strain TRI 5 possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data accessible under the accession number QFFM00000000.1 provides a reference for researchers interested in studying the genetic makeup and functional potential of this bacterium. In ecological terms, Bifidobacterium species are often associated with beneficial effects on host health, particularly in the context of gut microbiome composition. Their presence is linked to various health benefits, including the maintenance of gut barrier function and modulation of immune responses. Understanding the specific traits of Bifidobacterium callitrichidarum TRI 5 could shed light on its ecological roles and potential applications in probiotics or gut health therapies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium callitrichidarum
StrainTRI 5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c81, whole

Gene Summary

Adenine Count

590660 bp

Thymine Count

601184 bp

Guanine Count

964531 bp

Cytosine Count

964333 bp

Genome Length

3121265 bp

Protein-coding Genes

2434 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDF196_09435Not AvailableNegative2213761 - 221436621165.3
hypothetical proteinDF196_09440Not AvailableNegative2214738 - 2217656107192.0
dna primaseDF196_09445Not AvailableNegative2217880 - 221998277064.5
deoxyguanosinetriphosphate triphosphohydrolaseDF196_09450Not AvailableNegative2220219 - 222150547814.4
alanine racemaseDF196_09455Not AvailableNegative2221794 - 222315248157.5
amino acid permeaseDF196_09460Not AvailablePositive2223462 - 222491652722.2
n-acetyltransferaseDF196_09465Not AvailableNegative2225001 - 222554320470.2
s-ribosylhomocysteine lyaseDF196_09470Not AvailableNegative2225682 - 222618818971.3
murein l,d-transpeptidaseDF196_09475Not AvailableNegative2226344 - 222800258744.0
dna helicase recqDF196_09480Not AvailablePositive2228206 - 223013770319.8

Displaying genes 1821 – 1830 of 2530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.