Bifidobacterium callitrichidarum str. TRI 5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium callitrichidarum strain TRI 5 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species is part of the Bifidobacterium genus, known for its role in the gut microbiota of various hosts, including humans and other mammals. The strain TRI 5 possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data accessible under the accession number QFFM00000000.1 provides a reference for researchers interested in studying the genetic makeup and functional potential of this bacterium. In ecological terms, Bifidobacterium species are often associated with beneficial effects on host health, particularly in the context of gut microbiome composition. Their presence is linked to various health benefits, including the maintenance of gut barrier function and modulation of immune responses. Understanding the specific traits of Bifidobacterium callitrichidarum TRI 5 could shed light on its ecological roles and potential applications in probiotics or gut health therapies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium callitrichidarum
StrainTRI 5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c81, whole

Gene Summary

Adenine Count

590660 bp

Thymine Count

601184 bp

Guanine Count

964531 bp

Cytosine Count

964333 bp

Genome Length

3121265 bp

Protein-coding Genes

2434 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate aminotransferase family proteinDF196_09185Not AvailableNegative2151223 - 215259650499.0
hypothetical proteinDF196_09190Not AvailableNegative2152838 - 215398941695.5
abc transporter permeaseDF196_09195Not AvailableNegative2153995 - 215497535102.7
abc transporter permeaseDF196_09200Not AvailableNegative2154972 - 215595535873.6
spermidine/putrescine abc transporter atp-binding proteinDF196_09205Not AvailableNegative2155952 - 215707041100.4
asnc family transcriptional regulatorDF196_09210Not AvailablePositive2157438 - 215794418981.8
oleate hydrataseDF196_09215Not AvailableNegative2158139 - 216001670438.8
2,5-diketo-d-gluconic acid reductaseDF196_09220Not AvailableNegative2160217 - 216111933199.2
duf4186 domain-containing proteinDF196_09225Not AvailableNegative2161388 - 216178015043.7
dna polymerase iii subunit alphaDF196_09230Not AvailableNegative2161920 - 2165486131608.0

Displaying genes 1771 – 1780 of 2530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.