Bifidobacterium callitrichidarum str. TRI 5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium callitrichidarum strain TRI 5 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species is part of the Bifidobacterium genus, known for its role in the gut microbiota of various hosts, including humans and other mammals. The strain TRI 5 possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and stability within its ecological niche. The genomic data accessible under the accession number QFFM00000000.1 provides a reference for researchers interested in studying the genetic makeup and functional potential of this bacterium. In ecological terms, Bifidobacterium species are often associated with beneficial effects on host health, particularly in the context of gut microbiome composition. Their presence is linked to various health benefits, including the maintenance of gut barrier function and modulation of immune responses. Understanding the specific traits of Bifidobacterium callitrichidarum TRI 5 could shed light on its ecological roles and potential applications in probiotics or gut health therapies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium callitrichidarum
StrainTRI 5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c81, whole

Gene Summary

Adenine Count

590660 bp

Thymine Count

601184 bp

Guanine Count

964531 bp

Cytosine Count

964333 bp

Genome Length

3121265 bp

Protein-coding Genes

2434 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnase j family beta-casp ribonucleaseDF196_09075Not AvailableNegative2112546 - 211443568677.5
4-hydroxy-tetrahydrodipicolinate synthaseDF196_09080Not AvailableNegative2114500 - 211540531956.3
4-hydroxy-tetrahydrodipicolinate reductaseDF196_09085Not AvailableNegative2115527 - 211628226175.3
mfs transporterDF196_09090Not AvailableNegative2116629 - 211808651475.3
nucleaseDF196_09105Not AvailableNegative2122694 - 2126092121753.0
serine/threonine protein kinaseDF196_09110Not AvailablePositive2127288 - 212870951178.1
aaa family atpaseDF196_09115Not AvailablePositive2128795 - 2134773208109.0
aaa family atpaseDF196_09120Not AvailablePositive2134941 - 213628748203.0
duf58 domain-containing proteinDF196_09125Not AvailablePositive2136332 - 213755845051.1
transglutaminaseDF196_09130Not AvailablePositive2137897 - 214025784612.6

Displaying genes 1751 – 1760 of 2530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.