Desulfobacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Description

Desulfobacteraceae bacterium is a member of the Desulfobacteraceae family, notable for its unique metabolic capabilities in anaerobic environments. This bacterium is characterized by having six replicons, which may suggest a complex genomic architecture potentially beneficial for its adaptability and metabolic versatility. The organism is cataloged under several accessions, specifically QZKS00000000.1, QZKV00000000.1, QZKW00000000.1, QZKK00000000.1, RPPU00000000.1, and RPRI00000000.1. These accessions represent different genomic fragments or sequences that contribute to the overall understanding of its genetic makeup and functional potential. Desulfobacteraceae bacteria are primarily known for their role in the sulfur cycle, particularly in the process of sulfate reduction. They contribute to the biodegradation of organic matter in anaerobic environments, which is crucial for nutrient cycling in various ecosystems, including sediments and aquatic environments. By facilitating the reduction of sulfate to sulfide, they play an essential role in maintaining the balance of sulfur compounds in these habitats. This bacterium's ecological significance lies in its contribution to biogeochemical processes, particularly in anaerobic environments where organic matter decomposition is vital. Understanding its genomic characteristics can provide insights into its metabolic pathways and ecological roles, further emphasizing the importance of Desulfobacteraceae in ecosystem functioning and stability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Desulfobacteraceae bacterium isolate SURF_3

Gene Summary

Adenine Count

1148299 bp

Thymine Count

1150489 bp

Guanine Count

1108530 bp

Cytosine Count

1103509 bp

Genome Length

4510827 bp

Protein-coding Genes

4030 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseC4518_04110Not AvailablePositive869697 - 87077337988.3
proline--trna ligaseC4518_04115Not AvailablePositive870956 - 87247657355.4
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseC4518_04120Not AvailablePositive872500 - 87465081692.3
50s ribosomal protein l28C4518_04125Not AvailableNegative874683 - 8748776980.58
outer membrane protein assembly factor bamdC4518_04130Not AvailableNegative875010 - 87569925999.5
thioredoxin-disulfide reductaseC4518_04135Not AvailableNegative875757 - 87669233331.8
thioredoxinC4518_04140Not AvailableNegative876702 - 87702812051.7
phosphoribosyl-amp cyclohydrolaseC4518_04145Not AvailablePositive877323 - 87770314228.1
atp phosphoribosyltransferaseC4518_04150Not AvailablePositive877700 - 87857531996.8
yiha family ribosome biogenesis gtp-binding proteinC4518_04155Not AvailablePositive878576 - 87918422472.5

Displaying genes 811 – 820 of 28141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.