Desulfobacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Description

Desulfobacteraceae bacterium is a member of the Desulfobacteraceae family, notable for its unique metabolic capabilities in anaerobic environments. This bacterium is characterized by having six replicons, which may suggest a complex genomic architecture potentially beneficial for its adaptability and metabolic versatility. The organism is cataloged under several accessions, specifically QZKS00000000.1, QZKV00000000.1, QZKW00000000.1, QZKK00000000.1, RPPU00000000.1, and RPRI00000000.1. These accessions represent different genomic fragments or sequences that contribute to the overall understanding of its genetic makeup and functional potential. Desulfobacteraceae bacteria are primarily known for their role in the sulfur cycle, particularly in the process of sulfate reduction. They contribute to the biodegradation of organic matter in anaerobic environments, which is crucial for nutrient cycling in various ecosystems, including sediments and aquatic environments. By facilitating the reduction of sulfate to sulfide, they play an essential role in maintaining the balance of sulfur compounds in these habitats. This bacterium's ecological significance lies in its contribution to biogeochemical processes, particularly in anaerobic environments where organic matter decomposition is vital. Understanding its genomic characteristics can provide insights into its metabolic pathways and ecological roles, further emphasizing the importance of Desulfobacteraceae in ecosystem functioning and stability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Desulfobacteraceae bacterium isolate SURF_3

Gene Summary

Adenine Count

1148299 bp

Thymine Count

1150489 bp

Guanine Count

1108530 bp

Cytosine Count

1103509 bp

Genome Length

4510827 bp

Protein-coding Genes

4030 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorC4530_22575Not AvailableNegative4792217 - 479291526654.7
hypothetical proteinC4530_22580Not AvailablePositive4793021 - 47932368406.18
pilz domain-containing proteinC4530_22585Not AvailableNegative4793326 - 479374816167.5
type ii toxin-antitoxin system prevent-host-death family antitoxinC4530_22590Not AvailablePositive4794011 - 47942418705.48
type ii toxin-antitoxin system vapc family toxinC4530_22595Not AvailablePositive4794242 - 479461913975.2
sdr family oxidoreductaseC4530_22600Not AvailablePositive4794696 - 479551429774.1
zinc ribbon domain-containing proteinC4530_22605Not AvailableNegative4795850 - 47960476852.15
acyl-coa thioesteraseC4530_22610Not AvailableNegative4796125 - 479665220738.0
ammememoradisam system protein bC4530_22615Not AvailablePositive4796677 - 479753430636.4
hu family dna-binding proteinC4530_22620Not AvailableNegative4797605 - 47978749584.72

Displaying genes 27691 – 27700 of 28141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.