Desulfobacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Description

Desulfobacteraceae bacterium is a member of the Desulfobacteraceae family, notable for its unique metabolic capabilities in anaerobic environments. This bacterium is characterized by having six replicons, which may suggest a complex genomic architecture potentially beneficial for its adaptability and metabolic versatility. The organism is cataloged under several accessions, specifically QZKS00000000.1, QZKV00000000.1, QZKW00000000.1, QZKK00000000.1, RPPU00000000.1, and RPRI00000000.1. These accessions represent different genomic fragments or sequences that contribute to the overall understanding of its genetic makeup and functional potential. Desulfobacteraceae bacteria are primarily known for their role in the sulfur cycle, particularly in the process of sulfate reduction. They contribute to the biodegradation of organic matter in anaerobic environments, which is crucial for nutrient cycling in various ecosystems, including sediments and aquatic environments. By facilitating the reduction of sulfate to sulfide, they play an essential role in maintaining the balance of sulfur compounds in these habitats. This bacterium's ecological significance lies in its contribution to biogeochemical processes, particularly in anaerobic environments where organic matter decomposition is vital. Understanding its genomic characteristics can provide insights into its metabolic pathways and ecological roles, further emphasizing the importance of Desulfobacteraceae in ecosystem functioning and stability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Desulfobacteraceae bacterium isolate SURF_3

Gene Summary

Adenine Count

1148299 bp

Thymine Count

1150489 bp

Guanine Count

1108530 bp

Cytosine Count

1103509 bp

Genome Length

4510827 bp

Protein-coding Genes

4030 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulatorC4518_00850Not AvailableNegative176369 - 17705826383.1
nudix domain-containing proteinC4518_00860Not AvailablePositive177728 - 1778805393.62
4fe-4s dicluster domain-containing proteinC4518_00865Not AvailablePositive178048 - 17922044024.8
flavodoxin family proteinC4518_00870Not AvailableNegative179443 - 18014425404.8
nadp-dependent isocitrate dehydrogenaseC4518_00875Not AvailableNegative180851 - 18307082295.9
hypothetical proteinC4518_00880Not AvailableNegative183398 - 18377814450.8
16s rrna (guanine(966)-n(2))-methyltransferase rsmdC4518_00890Not AvailableNegative184746 - 18529420040.4
sigma-54-dependent fis family transcriptional regulatorC4518_00895Not AvailableNegative185294 - 18664349897.6
hamp domain-containing proteinC4518_00900Not AvailableNegative186710 - 18890882915.2
duf4390 domain-containing proteinC4518_00905Not AvailableNegative188988 - 18957222263.9

Displaying genes 171 – 180 of 28141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.