Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA11018
Gene Summary
Adenine Count
895595 bp
Thymine Count
902542 bp
Guanine Count
733581 bp
Cytosine Count
728343 bp
Genome Length
3363639 bp
Protein-coding Genes
2984 genes
Non-Coding Genes
39 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DDW85_06175 | Not Available | Negative | 1334726 - 1336546 | 69662.0 |
| susc/raga family tonb-linked outer membrane protein | DDW85_06180 | Not Available | Negative | 1336605 - 1339922 | 124178.0 |
| iron dicitrate transport regulator fecr | DDW85_06185 | Not Available | Negative | 1340148 - 1341335 | 45563.1 |
| rna polymerase subunit sigma-70 | DDW85_06190 | Not Available | Negative | 1341752 - 1342297 | 21665.1 |
| tonb-dependent receptor | DDW85_06195 | Not Available | Negative | 1342490 - 1344556 | 77244.4 |
| mate family efflux transporter | DDW85_06200 | Not Available | Positive | 1344715 - 1346007 | 48098.2 |
| nadp-dependent malic enzyme | DDW85_06205 | Not Available | Negative | 1346181 - 1348469 | 84314.2 |
| cation-efflux pump | DDW85_06210 | Not Available | Negative | 1348593 - 1349513 | 33576.2 |
| hypothetical protein | DDW85_06215 | Not Available | Positive | 1349970 - 1350380 | 15436.2 |
| hypothetical protein | DDW85_06220 | Not Available | Positive | 1350719 - 1354195 | 131401.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
