Microbacterium sp. Y-01

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Y-01 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP024170.1, which provides a reference for its genetic material and facilitates further research into its properties and potential applications. Microbacterium species are often noted for their diverse ecological roles, including their presence in soil, water, and as part of the microbiota of various organisms. They can be involved in biogeochemical cycles and may contribute to the degradation of organic compounds, highlighting their potential importance in environmental microbiology. The rod shape of Microbacterium sp. Y-01 may influence its motility and interaction with its environment, which is an aspect worth exploring in future studies. Understanding the ecological niche of this organism and its interactions with other microorganisms could provide insights into its role in nutrient cycling and ecosystem health. Further research could illuminate its applications in biotechnology or bioremediation, where the capabilities of rod-shaped bacteria are often harnessed for environmental cleanup processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Y-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Y-01 chromosome, complete genome.

Gene Summary

Adenine Count

583171 bp

Thymine Count

583401 bp

Guanine Count

1327370 bp

Cytosine Count

1326515 bp

Genome Length

3820457 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage holin family proteinCSX12_RS16885Not AvailableNegative3512811 - 351321814945.5
hypothetical proteinCSX12_RS16890Not AvailableNegative3513220 - 351363614214.9
protoporphyrinogen/coproporphyrinogen oxidaseCSX12_RS16895Not AvailableNegative3513783 - 351533952552.5
uroporphyrinogen decarboxylaseCSX12_RS16900Not AvailableNegative3515387 - 351640936379.5
glutamyl-trna reductaseCSX12_RS16905Not AvailablePositive3516491 - 351779845661.4
hhh-gpd-type base excision dna repair proteinCSX12_RS16910Not AvailablePositive3517823 - 351843121287.4
duf1801 domain-containing proteinCSX12_RS16915Not AvailablePositive3518431 - 351885615003.7
abc-f family atp-binding cassette domain-containing proteinCSX12_RS16920Not AvailableNegative3518978 - 352066661081.9
hypothetical proteinCSX12_RS16925Not AvailableNegative3520809 - 352135119640.9
glycine--trna ligaseCSX12_RS16930Not AvailableNegative3521398 - 352278352119.2

Displaying genes 3401 – 3410 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.