Microbacterium sp. Y-01

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Y-01 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP024170.1, which provides a reference for its genetic material and facilitates further research into its properties and potential applications. Microbacterium species are often noted for their diverse ecological roles, including their presence in soil, water, and as part of the microbiota of various organisms. They can be involved in biogeochemical cycles and may contribute to the degradation of organic compounds, highlighting their potential importance in environmental microbiology. The rod shape of Microbacterium sp. Y-01 may influence its motility and interaction with its environment, which is an aspect worth exploring in future studies. Understanding the ecological niche of this organism and its interactions with other microorganisms could provide insights into its role in nutrient cycling and ecosystem health. Further research could illuminate its applications in biotechnology or bioremediation, where the capabilities of rod-shaped bacteria are often harnessed for environmental cleanup processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Y-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Y-01 chromosome, complete genome.

Gene Summary

Adenine Count

583171 bp

Thymine Count

583401 bp

Guanine Count

1327370 bp

Cytosine Count

1326515 bp

Genome Length

3820457 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhCSX12_RS10780Not AvailableNegative2277417 - 227835533928.9
division/cell wall cluster transcriptional repressor mrazCSX12_RS10785Not AvailableNegative2278458 - 227888915961.1
duf3040 domain-containing proteinCSX12_RS10790Not AvailableNegative2279161 - 227953513431.3
polyprenyl synthetase family proteinCSX12_RS10795Not AvailablePositive2279633 - 228072139042.7
rv2175c family dna-binding proteinCSX12_RS10800Not AvailableNegative2280732 - 228108812886.5
lysm peptidoglycan-binding domain-containing proteinCSX12_RS10805Not AvailablePositive2281220 - 228243441334.1
stk1 family pasta domain-containing ser/thr kinaseCSX12_RS10810Not AvailablePositive2282511 - 228445769228.1
class ii 3-deoxy-7-phosphoheptulonate synthaseCSX12_RS10815Not AvailableNegative2284548 - 228588849425.5
lysophospholipid acyltransferase family proteinCSX12_RS10820Not AvailableNegative2285936 - 228662525227.0
amp-dependent synthetase/ligaseCSX12_RS10825Not AvailablePositive2286777 - 228860665251.1

Displaying genes 2171 – 2180 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.