Microbacterium sp. Y-01

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Y-01 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP024170.1, which provides a reference for its genetic material and facilitates further research into its properties and potential applications. Microbacterium species are often noted for their diverse ecological roles, including their presence in soil, water, and as part of the microbiota of various organisms. They can be involved in biogeochemical cycles and may contribute to the degradation of organic compounds, highlighting their potential importance in environmental microbiology. The rod shape of Microbacterium sp. Y-01 may influence its motility and interaction with its environment, which is an aspect worth exploring in future studies. Understanding the ecological niche of this organism and its interactions with other microorganisms could provide insights into its role in nutrient cycling and ecosystem health. Further research could illuminate its applications in biotechnology or bioremediation, where the capabilities of rod-shaped bacteria are often harnessed for environmental cleanup processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Y-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Y-01 chromosome, complete genome.

Gene Summary

Adenine Count

583171 bp

Thymine Count

583401 bp

Guanine Count

1327370 bp

Cytosine Count

1326515 bp

Genome Length

3820457 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coenzyme f420-0:l-glutamate ligaseCSX12_RS09375Not AvailableNegative1989797 - 199048924681.0
rna polymerase sigma factorCSX12_RS09380Not AvailableNegative1990489 - 199173345741.2
proteasome assembly chaperone family proteinCSX12_RS09385Not AvailableNegative1991901 - 199284234625.7
leucyl aminopeptidaseCSX12_RS09390Not AvailablePositive1992956 - 199442850055.2
dihydrolipoyl dehydrogenaseCSX12_RS09395Not AvailablePositive1994432 - 199580547540.9
2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferaseCSX12_RS09400Not AvailablePositive1995872 - 199768060330.1
hypothetical proteinCSX12_RS09405Not AvailableNegative1997695 - 199914650614.0
duf4191 family proteinCSX12_RS09410Not AvailablePositive1999315 - 200002525517.5
rimk family alpha-l-glutamate ligaseCSX12_RS09415Not AvailableNegative2000083 - 200127043428.7
atp-dependent zinc proteaseCSX12_RS09420Not AvailablePositive2001288 - 200177618885.4

Displaying genes 1891 – 1900 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.