Microbacterium sp. Y-01

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Y-01 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP024170.1, which provides a reference for its genetic material and facilitates further research into its properties and potential applications. Microbacterium species are often noted for their diverse ecological roles, including their presence in soil, water, and as part of the microbiota of various organisms. They can be involved in biogeochemical cycles and may contribute to the degradation of organic compounds, highlighting their potential importance in environmental microbiology. The rod shape of Microbacterium sp. Y-01 may influence its motility and interaction with its environment, which is an aspect worth exploring in future studies. Understanding the ecological niche of this organism and its interactions with other microorganisms could provide insights into its role in nutrient cycling and ecosystem health. Further research could illuminate its applications in biotechnology or bioremediation, where the capabilities of rod-shaped bacteria are often harnessed for environmental cleanup processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Y-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Y-01 chromosome, complete genome.

Gene Summary

Adenine Count

583171 bp

Thymine Count

583401 bp

Guanine Count

1327370 bp

Cytosine Count

1326515 bp

Genome Length

3820457 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate synthaseCSX12_RS08975Not AvailableNegative1905409 - 190649738822.3
shikimate kinaseCSX12_RS08980Not AvailableNegative1906494 - 190701218970.6
chorismate synthaseCSX12_RS08985Not AvailableNegative1906996 - 190822543402.6
shikimate dehydrogenaseCSX12_RS08990Not AvailableNegative1908284 - 190911428371.8
endolytic transglycosylase mltgCSX12_RS08995Not AvailableNegative1909101 - 191059152488.1
holliday junction resolvase ruvxCSX12_RS09000Not AvailableNegative1910594 - 191106716587.8
alanine--trna ligaseCSX12_RS09005Not AvailableNegative1911064 - 191372495760.2
hypothetical proteinCSX12_RS09010Not AvailableNegative1913780 - 19139686872.21
30s ribosomal protein s4CSX12_RS09015Not AvailableNegative1914079 - 191470823836.9
replication-associated recombination protein aCSX12_RS09020Not AvailableNegative1914890 - 191624547848.0

Displaying genes 1811 – 1820 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.