Microbacterium sp. Y-01

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Y-01 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP024170.1, which provides a reference for its genetic material and facilitates further research into its properties and potential applications. Microbacterium species are often noted for their diverse ecological roles, including their presence in soil, water, and as part of the microbiota of various organisms. They can be involved in biogeochemical cycles and may contribute to the degradation of organic compounds, highlighting their potential importance in environmental microbiology. The rod shape of Microbacterium sp. Y-01 may influence its motility and interaction with its environment, which is an aspect worth exploring in future studies. Understanding the ecological niche of this organism and its interactions with other microorganisms could provide insights into its role in nutrient cycling and ecosystem health. Further research could illuminate its applications in biotechnology or bioremediation, where the capabilities of rod-shaped bacteria are often harnessed for environmental cleanup processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Y-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Y-01 chromosome, complete genome.

Gene Summary

Adenine Count

583171 bp

Thymine Count

583401 bp

Guanine Count

1327370 bp

Cytosine Count

1326515 bp

Genome Length

3820457 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxinCSX12_RS05990Not AvailablePositive1283467 - 128378711782.7
succinyldiaminopimelate transaminaseCSX12_RS05995Not AvailablePositive1283797 - 128490939922.6
citrate synthaseCSX12_RS06000Not AvailablePositive1285099 - 128638847578.6
dead/deah box helicaseCSX12_RS06005Not AvailableNegative1286454 - 128783048175.7
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseCSX12_RS06010Not AvailableNegative1288082 - 128902932468.5
succinyl-diaminopimelate desuccinylaseCSX12_RS06015Not AvailablePositive1289096 - 129016938263.3
hypothetical proteinCSX12_RS06020Not AvailablePositive1290151 - 129136844531.0
duf3117 domain-containing proteinCSX12_RS06025Not AvailablePositive1291463 - 12916365906.31
o-methyltransferaseCSX12_RS06030Not AvailableNegative1291725 - 129236322141.3
twin-arginine translocase tata/tate family subunitCSX12_RS06035Not AvailablePositive1292453 - 129282713934.8

Displaying genes 1211 – 1220 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.