Microbacterium sp. Y-01

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Y-01 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP024170.1, which provides a reference for its genetic material and facilitates further research into its properties and potential applications. Microbacterium species are often noted for their diverse ecological roles, including their presence in soil, water, and as part of the microbiota of various organisms. They can be involved in biogeochemical cycles and may contribute to the degradation of organic compounds, highlighting their potential importance in environmental microbiology. The rod shape of Microbacterium sp. Y-01 may influence its motility and interaction with its environment, which is an aspect worth exploring in future studies. Understanding the ecological niche of this organism and its interactions with other microorganisms could provide insights into its role in nutrient cycling and ecosystem health. Further research could illuminate its applications in biotechnology or bioremediation, where the capabilities of rod-shaped bacteria are often harnessed for environmental cleanup processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Y-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Y-01 chromosome, complete genome.

Gene Summary

Adenine Count

583171 bp

Thymine Count

583401 bp

Guanine Count

1327370 bp

Cytosine Count

1326515 bp

Genome Length

3820457 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phoh family proteinCSX12_RS05645Not AvailablePositive1214588 - 121587446458.6
dihydroxyacetone kinase family proteinCSX12_RS05650Not AvailablePositive1216009 - 121773659465.8
ribose-5-phosphate isomeraseCSX12_RS05655Not AvailablePositive1217741 - 121819616012.0
triose-phosphate isomerase family proteinCSX12_RS05660Not AvailablePositive1218200 - 121895526750.0
gntr family transcriptional regulatorCSX12_RS05665Not AvailablePositive1218952 - 121967426871.9
sugar phosphate isomerase/epimerase family proteinCSX12_RS05670Not AvailablePositive1219879 - 122085034980.3
4-hydroxythreonine-4-phosphate dehydrogenase pdxaCSX12_RS05675Not AvailablePositive1220873 - 122187435173.8
tripartite tricarboxylate transporter substrate binding proteinCSX12_RS05680Not AvailablePositive1221922 - 122289333318.7
tripartite tricarboxylate transporter tctb family proteinCSX12_RS05685Not AvailablePositive1222896 - 122339616811.5
tripartite tricarboxylate transporter permeaseCSX12_RS05690Not AvailablePositive1223396 - 122488651655.1

Displaying genes 1141 – 1150 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.