Janthinobacterium sp. ROICE36

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium sp. ROICE36 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates mobility. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genome of Janthinobacterium sp. ROICE36 is cataloged under the accession number PEBS00000000.1, providing a reference for further genomic studies. The presence of flagella in Janthinobacterium sp. ROICE36 suggests that it may have enhanced motility, which could be advantageous for locating nutrients or escaping unfavorable conditions. As a Gram-negative bacterium, it has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane. This structural feature may influence its interactions with other microorganisms and its resilience to certain environmental stresses. In an ecological context, Janthinobacterium species are often found in soil and aquatic environments, where they can play significant roles in nutrient cycling and decomposition. Their motility could facilitate their movement through these habitats, allowing them to interact with various substrates and participate in microbial communities. Understanding the traits of Janthinobacterium sp. ROICE36 can provide insights into its ecological roles, potential applications in bioremediation, or its interactions within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium sp. ROICE36
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium sp. ROICE36 NODE_212_length_313_cov_81.9301,

Gene Summary

Adenine Count

1129867 bp

Thymine Count

1141451 bp

Guanine Count

1850630 bp

Cytosine Count

1855476 bp

Genome Length

5977780 bp

Protein-coding Genes

5137 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor domain-containing diguanylate cyclaseCSZ94_22550Not AvailablePositive4912461 - 491410158967.2
laci family transcriptional regulatorCSZ94_22555Not AvailableNegative4914153 - 491524138169.8
glucokinaseCSZ94_22560Not AvailableNegative4915225 - 491713867927.8
porinCSZ94_22565Not AvailablePositive4917483 - 49177027415.94
is5/is1182 family transposaseCSZ94_22570Not AvailableNegative4917703 - 49178505804.97
hypothetical proteinCSZ94_22575Not AvailablePositive4917989 - 491848617889.3
transporterCSZ94_22580Not AvailablePositive4918700 - 49189187746.42
hypothetical proteinCSZ94_22590Not AvailableNegative4919722 - 492098145612.6
peptidase s11CSZ94_22595Not AvailablePositive4921399 - 492227731540.7
hypothetical proteinCSZ94_22600Not AvailableNegative4922278 - 492321032503.8

Displaying genes 4391 – 4400 of 5285 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.