Bifidobacterium simiarum

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium simiarum is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests a degree of motility, which may play a role in its ecological interactions and colonization within its environment. The bacterium is notable for having a single replicon, indicating a simplified genomic architecture that may contribute to its adaptability and evolutionary dynamics. The accession number for Bifidobacterium simiarum is PEBK00000000.1, which serves as a reference for researchers looking to study its genetic and functional properties further. Understanding the genomic features of Bifidobacterium simiarum may offer insights into its metabolic capabilities and role in various ecosystems, particularly those involving symbiotic relationships with host organisms. The presence of flagella in Bifidobacterium simiarum could influence its ecological niche by facilitating movement toward nutrient sources or favorable environments. This motility may also enhance its competitive edge in microbial communities, allowing it to establish itself effectively. Overall, the combination of its rod shape, flagellar presence, and genomic characteristics suggests that Bifidobacterium simiarum plays a significant role in its ecosystem, potentially as a beneficial member of the microbiota in various habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium simiarum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium simiarum strain TRI 7

Gene Summary

Adenine Count

498687 bp

Thymine Count

486674 bp

Guanine Count

866323 bp

Cytosine Count

869557 bp

Genome Length

2721281 bp

Protein-coding Genes

2025 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna gyrase subunit aCSQ87_09975Not AvailableNegative2560931 - 256358898301.2
dna topoisomerase (atp-hydrolyzing) subunit bCSQ87_09980Not AvailableNegative2563821 - 256595378110.1
hypothetical proteinCSQ87_09985Not AvailableNegative2566319 - 256686720199.3
dna replication and repair protein recfCSQ87_09990Not AvailableNegative2566864 - 256825850646.6
dna polymerase iii subunit betaCSQ87_09995Not AvailableNegative2568366 - 256949040552.1
chromosomal replication initiator protein dnaaCSQ87_10000Not AvailableNegative2570003 - 257164360205.1
50s ribosomal protein l34CSQ87_10005Not AvailablePositive2572041 - 25721755361.74
ribonuclease p protein componentCSQ87_10010Not AvailablePositive2572217 - 257275019609.1
membrane protein insertion efficiency factor yiddCSQ87_10015Not AvailablePositive2572778 - 257308311794.0
membrane protein insertase yidcCSQ87_10020Not AvailablePositive2573094 - 257412239344.4

Displaying genes 1961 – 1970 of 2087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.