Bifidobacterium simiarum

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium simiarum is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests a degree of motility, which may play a role in its ecological interactions and colonization within its environment. The bacterium is notable for having a single replicon, indicating a simplified genomic architecture that may contribute to its adaptability and evolutionary dynamics. The accession number for Bifidobacterium simiarum is PEBK00000000.1, which serves as a reference for researchers looking to study its genetic and functional properties further. Understanding the genomic features of Bifidobacterium simiarum may offer insights into its metabolic capabilities and role in various ecosystems, particularly those involving symbiotic relationships with host organisms. The presence of flagella in Bifidobacterium simiarum could influence its ecological niche by facilitating movement toward nutrient sources or favorable environments. This motility may also enhance its competitive edge in microbial communities, allowing it to establish itself effectively. Overall, the combination of its rod shape, flagellar presence, and genomic characteristics suggests that Bifidobacterium simiarum plays a significant role in its ecosystem, potentially as a beneficial member of the microbiota in various habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium simiarum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium simiarum strain TRI 7

Gene Summary

Adenine Count

498687 bp

Thymine Count

486674 bp

Guanine Count

866323 bp

Cytosine Count

869557 bp

Genome Length

2721281 bp

Protein-coding Genes

2025 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter, permease protein pstaCSQ87_09450Not AvailableNegative2434602 - 243559435476.4
phosphate abc transporter permease subunit pstcCSQ87_09455Not AvailableNegative2435594 - 243655933858.2
phosphate abc transporter substrate-binding protein pstsCSQ87_09460Not AvailableNegative2436671 - 243781339382.6
dna-binding response regulatorCSQ87_09465Not AvailableNegative2438256 - 243896026411.9
two-component sensor histidine kinaseCSQ87_09470Not AvailableNegative2439187 - 244053348195.9
is30 family transposaseCSQ87_09485Not AvailablePositive2441599 - 244267840248.9
cupinCSQ87_09490Not AvailablePositive2442824 - 244339019624.8
nad(p) transhydrogenase subunit betaCSQ87_09495Not AvailableNegative2443564 - 244497649009.0
nad(p) transhydrogenase subunit alphaCSQ87_09500Not AvailableNegative2444976 - 244529011004.9
nad(p) transhydrogenase subunit alphaCSQ87_09505Not AvailableNegative2445293 - 244647441047.7

Displaying genes 1861 – 1870 of 2087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.