Bifidobacterium simiarum

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium simiarum is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests a degree of motility, which may play a role in its ecological interactions and colonization within its environment. The bacterium is notable for having a single replicon, indicating a simplified genomic architecture that may contribute to its adaptability and evolutionary dynamics. The accession number for Bifidobacterium simiarum is PEBK00000000.1, which serves as a reference for researchers looking to study its genetic and functional properties further. Understanding the genomic features of Bifidobacterium simiarum may offer insights into its metabolic capabilities and role in various ecosystems, particularly those involving symbiotic relationships with host organisms. The presence of flagella in Bifidobacterium simiarum could influence its ecological niche by facilitating movement toward nutrient sources or favorable environments. This motility may also enhance its competitive edge in microbial communities, allowing it to establish itself effectively. Overall, the combination of its rod shape, flagellar presence, and genomic characteristics suggests that Bifidobacterium simiarum plays a significant role in its ecosystem, potentially as a beneficial member of the microbiota in various habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium simiarum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium simiarum strain TRI 7

Gene Summary

Adenine Count

498687 bp

Thymine Count

486674 bp

Guanine Count

866323 bp

Cytosine Count

869557 bp

Genome Length

2721281 bp

Protein-coding Genes

2025 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase large subunitCSQ87_05265Not AvailablePositive1380685 - 138208850520.5
3-isopropylmalate dehydratase small subunitCSQ87_05270Not AvailablePositive1382463 - 138314925864.0
diguanylate cyclaseCSQ87_05275Not AvailablePositive1383845 - 138500841144.5
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCSQ87_05280Not AvailablePositive1385266 - 138658847243.2
1-acyl-sn-glycerol-3-phosphate acyltransferaseCSQ87_05285Not AvailablePositive1387029 - 138791633396.5
aquaporinCSQ87_05290Not AvailablePositive1388229 - 138896926311.3
trna glutamyl-q(34) synthetase gluqrsCSQ87_05295Not AvailablePositive1389111 - 139042147648.3
class c sortaseCSQ87_05300Not AvailablePositive1390926 - 139185833981.3
yggs family pyridoxal phosphate-dependent enzymeCSQ87_05305Not AvailablePositive1392110 - 139294629414.2
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCSQ87_05310Not AvailablePositive1393034 - 139384929023.6

Displaying genes 1031 – 1040 of 2087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.