Massilia violaceinigra str. B2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia violaceinigra strain B2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism has a single replicon, indicating a streamlined genomic structure. The strain is cataloged with the accession number NZ_CP024608.1, which provides a reference for genomic studies and further research. Massilia violaceinigra belongs to a genus known for its diverse ecological roles and potential applications in biotechnology. While specific ecological interactions or functions of strain B2 are not detailed, the fact that it is a member of the Massilia genus suggests that it may play a role in various environments, possibly including soil, water, or as part of microbial communities associated with plants or animals. The Gram-negative nature of this strain suggests it possesses an outer membrane that could confer specific advantages in terms of environmental resilience and resistance to certain antibiotics. Understanding the characteristics of Massilia violaceinigra str. B2 can contribute to insights into its ecological niche and potential applications in bioremediation, agriculture, or other fields where microbial processes are beneficial. This highlights the importance of studying such organisms to uncover their roles in ecosystems and their potential utility in scientific and industrial applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia violaceinigra
StrainB2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia violaceinigra str. B2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia violaceinigra strain B2 chromosome.

Gene Summary

Adenine Count

1352914 bp

Thymine Count

1363385 bp

Guanine Count

2375633 bp

Cytosine Count

2351007 bp

Genome Length

7442939 bp

Protein-coding Genes

6301 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-hydroxyacyl-coa dehydrogenase paahCR152_RS12120Not AvailablePositive2646584 - 264813154306.0
hydroxyphenylacetyl-coa thioesterase paaiCR152_RS12125Not AvailablePositive2648135 - 264857215550.6
phenylacetate--coa ligase paakCR152_RS12130Not AvailablePositive2648583 - 264991448942.7
3-oxoadipyl-coa thiolaseCR152_RS12135Not AvailablePositive2649938 - 265114341658.3
phenylacetic acid degradation protein paayCR152_RS12140Not AvailablePositive2651154 - 265175021536.4
phenylacetic acid degradation bifunctional protein paazCR152_RS12145Not AvailablePositive2651775 - 265382673060.9
duf1501 domain-containing proteinCR152_RS12150Not AvailableNegative2653944 - 265534448857.8
duf1800 domain-containing proteinCR152_RS12155Not AvailableNegative2655353 - 265748274288.2
m24 family metallopeptidaseCR152_RS12165Not AvailableNegative2657727 - 265895044021.6
trap transporter large permeaseCR152_RS12170Not AvailableNegative2658956 - 266064460024.2

Displaying genes 2581 – 2590 of 6515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.