Clostridium sp. HMb25

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. HMb25 is a bacterium characterized by having a single replicon, indicating a streamlined genetic organization. This trait can influence the organism's replication and overall genomic stability. The bacterium is cataloged under the accession number PDDG00000000.1, which serves as a unique identifier for its genomic data. As a member of the genus Clostridium, this species is likely to exhibit anaerobic metabolism, which is a common feature among clostridia. These organisms are typically found in environments devoid of oxygen, such as soil, sediments, and the gastrointestinal tracts of animals. Clostridium species are known for their ability to produce endospores, enabling them to survive harsh conditions. This adaptation is crucial for their ecological niches, allowing them to persist in environments where resources may be sporadic or where they may face competitive pressures from other microorganisms. The ecological role of Clostridium sp. HMb25 could be significant, particularly in the degradation of complex organic materials, contributing to nutrient cycling in its environment. Understanding its specific interactions within microbial communities can provide insights into its potential applications in biotechnology, such as waste treatment or bioenergy production. Overall, the unique traits of Clostridium sp. HMb25 underline its potential significance in both ecological systems and applied microbiological research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. HMb25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. HMb25 unitig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

1413369 bp

Thymine Count

1433104 bp

Guanine Count

1286940 bp

Cytosine Count

1310597 bp

Genome Length

5444010 bp

Protein-coding Genes

3969 genes

Non-Coding Genes

324 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is200/is605 family transposaseCRH03_14600Not AvailablePositive3074912 - 307536717955.0
murr/rpir family transcriptional regulatorCRH03_14615Not AvailablePositive3077356 - 307820432145.7
manganese efflux pumpCRH03_14620Not AvailableNegative3078321 - 307888119987.2
phosphate abc transporter substrate-binding proteinCRH03_14625Not AvailablePositive3079332 - 308026131777.2
phosphate abc transporter permease subunit pstcCRH03_14630Not AvailablePositive3080407 - 308134232843.4
phosphate abc transporter, permease protein pstaCRH03_14635Not AvailablePositive3081335 - 308220431297.3
phosphate abc transporter atp-binding proteinCRH03_14640Not AvailablePositive3082217 - 308299028815.7
phosphate transport system regulatory protein phouCRH03_14645Not AvailablePositive3083041 - 308370324990.0
phosphate transport system regulatory protein phouCRH03_14650Not AvailablePositive3083725 - 308438124735.7
hsp20/alpha crystallin family proteinCRH03_14655Not AvailableNegative3084463 - 308490016752.5

Displaying genes 2611 – 2620 of 4293 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.