Pectobacterium parvum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium parvum is a Gram-negative bacterium known for its role as a plant pathogen. It possesses flagella, which contribute to its motility, allowing it to navigate through various environments. This organism has a single replicon, indicating a streamlined genomic structure that may facilitate its adaptability and efficiency in replication. The accessions for Pectobacterium parvum are cataloged under JQHN00000000.1, providing a reference point for researchers interested in studying its genetic makeup and pathogenic mechanisms. The presence of flagella suggests that P. parvum may be capable of moving toward nutrient sources or away from unfavorable conditions, which is a common trait among motile bacteria. Ecologically, Pectobacterium parvum is significant as it can affect agricultural productivity by causing diseases in crops. Its ability to move and establish infections can lead to substantial economic losses in agricultural systems. Understanding the traits of P. parvum, such as its Gram-negative classification and motility due to flagella, is essential for developing management strategies to mitigate its impact on plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium parvum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium parvum strain NCPPB 3395 ID_243, whole genome

Gene Summary

Adenine Count

1122021 bp

Thymine Count

1117456 bp

Guanine Count

1163635 bp

Cytosine Count

1171030 bp

Genome Length

4574142 bp

Protein-coding Genes

3795 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna guanosine-2'-o-methyltransferaseKP17_18345Not AvailableNegative4063653 - 406434525732.0
(p)ppgpp synthetaseKP17_18350Not AvailableNegative4064351 - 406645079136.2
dna-directed rna polymerase subunit omegaKP17_18355Not AvailableNegative4066469 - 406674410269.2
guanylate kinaseKP17_18360Not AvailableNegative4066798 - 406742123562.1
nad-dependent dna ligase ligbKP17_18370Not AvailablePositive4067736 - 406942764264.2
phosphoethanolamine transferaseKP17_18375Not AvailablePositive4069684 - 407136363731.6
Trna-proNot AvailableNot AvailablePositive4071495 - 4071571Not Available
virulence proteinKP17_18385Not AvailablePositive4072022 - 407255219364.8
diguanylate phosphodiesteraseKP17_18390Not AvailableNegative4072596 - 407420060547.1
membrane proteinKP17_18395Not AvailableNegative4074293 - 407549243677.1

Displaying genes 3461 – 3470 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.