Pectobacterium parvum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium parvum is a Gram-negative bacterium known for its role as a plant pathogen. It possesses flagella, which contribute to its motility, allowing it to navigate through various environments. This organism has a single replicon, indicating a streamlined genomic structure that may facilitate its adaptability and efficiency in replication. The accessions for Pectobacterium parvum are cataloged under JQHN00000000.1, providing a reference point for researchers interested in studying its genetic makeup and pathogenic mechanisms. The presence of flagella suggests that P. parvum may be capable of moving toward nutrient sources or away from unfavorable conditions, which is a common trait among motile bacteria. Ecologically, Pectobacterium parvum is significant as it can affect agricultural productivity by causing diseases in crops. Its ability to move and establish infections can lead to substantial economic losses in agricultural systems. Understanding the traits of P. parvum, such as its Gram-negative classification and motility due to flagella, is essential for developing management strategies to mitigate its impact on plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium parvum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium parvum strain NCPPB 3395 ID_243, whole genome

Gene Summary

Adenine Count

1122021 bp

Thymine Count

1117456 bp

Guanine Count

1163635 bp

Cytosine Count

1171030 bp

Genome Length

4574142 bp

Protein-coding Genes

3795 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonucleaseKP17_05525Not AvailableNegative1198319 - 119946443424.5
l-fucose dehydrogenaseKP17_05530Not AvailableNegative1199724 - 120091443151.4
hypothetical proteinKP17_05535Not AvailableNegative1200999 - 120151719148.0
hxlr family transcriptional regulatorKP17_05540Not AvailablePositive1201648 - 120204614691.7
amino acid abc transporter substrate-binding proteinKP17_05545Not AvailablePositive1202203 - 120297027699.8
cysteine abc transporter permeaseKP17_05550Not AvailablePositive1203060 - 120372524509.6
amino acid abc transporter substrate-binding proteinKP17_05555Not AvailablePositive1204101 - 120512637027.2
amino acid abc transporter permeaseKP17_05560Not AvailablePositive1205193 - 120637143463.0
amino acid abc transporter permeaseKP17_05565Not AvailablePositive1206387 - 120747540718.7
abc transporter atp-binding proteinKP17_05570Not AvailablePositive1207484 - 120824528627.7

Displaying genes 1051 – 1060 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.