Campylobacter sp. MIT 12-5580

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter sp. MIT 12-5580 is characterized by having a single replicon, which is a significant trait in understanding its genetic structure and replication mechanisms. The strain is cataloged under the accession number NXLK00000000.1, which provides a reference for researchers seeking detailed genomic information. Campylobacter species are generally known for their role as pathogens, particularly in causing gastroenteritis in humans and animals. While specific pathogenicity data for MIT 12-5580 is not provided, the genus Campylobacter is often associated with foodborne illnesses, primarily through contaminated poultry, water, and unpasteurized dairy products. In terms of its ecological role, Campylobacter sp. are typically found in the intestines of birds and mammals, indicating a potential adaptation to a host-associated lifestyle. Their presence in these environments suggests they may play a role in the gut microbiome of various animals, potentially influencing the health and disease dynamics within these ecosystems. The single replicon nature of Campylobacter sp. MIT 12-5580 might provide insights into its genomic stability and adaptability, which is crucial for survival in various environments. Understanding these traits can help elucidate the ecological interactions and potential impact this strain may have in both natural and agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter sp. MIT 12-5580
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter sp. MIT 12-5580
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter sp. MIT 12-5580 C12-5580_40_333170.256, whole genome

Gene Summary

Adenine Count

594953 bp

Thymine Count

600203 bp

Guanine Count

325916 bp

Cytosine Count

308267 bp

Genome Length

1829339 bp

Protein-coding Genes

1777 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferritinCQA38_06600Not AvailableNegative1305407 - 130590118959.5
phosphate-binding proteinCQA38_06605Not AvailablePositive1306223 - 130721235727.9
ligand-gated channelCQA38_06610Not AvailableNegative1307295 - 130940077224.4
phosphate abc transporter permease subunit pstcCQA38_06615Not AvailablePositive1309564 - 131047832769.3
phosphate abc transporter permease ptsaCQA38_06620Not AvailablePositive1310475 - 131157239779.2
phosphate abc transporter atp-binding proteinCQA38_06625Not AvailablePositive1311566 - 131230627573.8
chemotaxis proteinCQA38_06630Not AvailablePositive1312513 - 131461276917.1
carboxy-s-adenosyl-l-methionine synthase cmoaCQA38_06635Not AvailableNegative1314644 - 131535127323.1
cell division protein ftskCQA38_06640Not AvailablePositive1315553 - 1318249101774.0
gnat family n-acetyltransferaseCQA38_06645Not AvailablePositive1318246 - 131868316675.4

Displaying genes 1311 – 1320 of 1823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.