Escherichia sp. E4385

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia sp. E4385 is a Gram-negative bacterium characterized by the presence of flagella, which are important for motility. The organism has a single replicon, indicating a streamlined genomic architecture that contributes to its adaptability and replication efficiency. This trait is significant as it suggests a potential for rapid growth and reproduction under favorable environmental conditions. The accession number for Escherichia sp. E4385 is VATU00000000.1, which allows for the identification and retrieval of its genomic data from biological databases. Understanding the genetic and phenotypic traits of Escherichia sp. E4385 can provide insights into its ecological role, particularly in relation to its motility and adaptability in various environments. The presence of flagella may enable Escherichia sp. E4385 to navigate through liquid environments, enhancing its ability to colonize niches and interact with other microorganisms. This motility can play a crucial role in its ecological interactions, such as nutrient acquisition and competition with other microbial species. Overall, the traits of Escherichia sp. E4385 highlight its potential significance in microbial ecosystems, where motility and genomic efficiency are key factors in survival and ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia sp. E4385
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia sp. E4385
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia sp. E4385 sequence42, whole genome shotgun sequence.

Gene Summary

Adenine Count

1212776 bp

Thymine Count

1206788 bp

Guanine Count

1239673 bp

Cytosine Count

1239842 bp

Genome Length

4899277 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

298 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsskFEK49_23220Not AvailableNegative4759545 - 476089149811.2
type vi secretion system lipoprotein tssjFEK49_23225Not AvailableNegative4760894 - 476141819296.0
type vi secretion system-associated fha domain protein taghFEK49_23230Not AvailableNegative4761415 - 476270747750.6
type vi secretion system baseplate subunit tssgFEK49_23235Not AvailableNegative4762712 - 476376139101.0
type vi secretion system baseplate subunit tssfFEK49_23240Not AvailableNegative4763725 - 476556670633.5
type vi secretion system baseplate subunit tsseFEK49_23245Not AvailableNegative4765572 - 476599716020.1
type vi secretion system contractile sheath large subunitFEK49_23250Not AvailableNegative4766002 - 476748655634.9
type vi secretion system contractile sheath small subunitFEK49_23255Not AvailableNegative4767509 - 476801218390.1
hcp family type vi secretion system effectorFEK49_23260Not AvailablePositive4768715 - 476923319147.7
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseFEK49_23265Not AvailablePositive4769833 - 477142257328.4

Displaying genes 4561 – 4570 of 4708 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.