Escherichia sp. E4385

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia sp. E4385 is a Gram-negative bacterium characterized by the presence of flagella, which are important for motility. The organism has a single replicon, indicating a streamlined genomic architecture that contributes to its adaptability and replication efficiency. This trait is significant as it suggests a potential for rapid growth and reproduction under favorable environmental conditions. The accession number for Escherichia sp. E4385 is VATU00000000.1, which allows for the identification and retrieval of its genomic data from biological databases. Understanding the genetic and phenotypic traits of Escherichia sp. E4385 can provide insights into its ecological role, particularly in relation to its motility and adaptability in various environments. The presence of flagella may enable Escherichia sp. E4385 to navigate through liquid environments, enhancing its ability to colonize niches and interact with other microorganisms. This motility can play a crucial role in its ecological interactions, such as nutrient acquisition and competition with other microbial species. Overall, the traits of Escherichia sp. E4385 highlight its potential significance in microbial ecosystems, where motility and genomic efficiency are key factors in survival and ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia sp. E4385
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia sp. E4385
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia sp. E4385 sequence42, whole genome shotgun sequence.

Gene Summary

Adenine Count

1212776 bp

Thymine Count

1206788 bp

Guanine Count

1239673 bp

Cytosine Count

1239842 bp

Genome Length

4899277 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

298 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 10 proteinFEK49_21155Not AvailablePositive4364501 - 436582049534.7
diguanylate cyclase doscFEK49_21160Not AvailablePositive4366170 - 436755253011.5
oxygen-sensing cyclic-di-gmp phosphodiesteraseFEK49_21165Not AvailablePositive4367577 - 436997690461.0
d-alanyl-d-alanine dipeptidaseFEK49_21170Not AvailablePositive4370233 - 437081421254.2
abc transporter substrate-binding proteinFEK49_21175Not AvailablePositive4370828 - 437237857544.2
abc transporter permeaseFEK49_21180Not AvailablePositive4372380 - 437340237403.4
d,d-dipeptide abc transporter permeaseFEK49_21185Not AvailablePositive4373399 - 437429532041.1
abc transporter atp-binding proteinFEK49_21190Not AvailablePositive4374292 - 437527835995.0
atp-binding cassette domain-containing proteinFEK49_21195Not AvailablePositive4375271 - 437619734576.0
lysr family transcriptional regulatorFEK49_21200Not AvailableNegative4376253 - 437714332625.8

Displaying genes 4201 – 4210 of 4708 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.