Escherichia sp. E4385

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia sp. E4385 is a Gram-negative bacterium characterized by the presence of flagella, which are important for motility. The organism has a single replicon, indicating a streamlined genomic architecture that contributes to its adaptability and replication efficiency. This trait is significant as it suggests a potential for rapid growth and reproduction under favorable environmental conditions. The accession number for Escherichia sp. E4385 is VATU00000000.1, which allows for the identification and retrieval of its genomic data from biological databases. Understanding the genetic and phenotypic traits of Escherichia sp. E4385 can provide insights into its ecological role, particularly in relation to its motility and adaptability in various environments. The presence of flagella may enable Escherichia sp. E4385 to navigate through liquid environments, enhancing its ability to colonize niches and interact with other microorganisms. This motility can play a crucial role in its ecological interactions, such as nutrient acquisition and competition with other microbial species. Overall, the traits of Escherichia sp. E4385 highlight its potential significance in microbial ecosystems, where motility and genomic efficiency are key factors in survival and ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia sp. E4385
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia sp. E4385
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia sp. E4385 sequence42, whole genome shotgun sequence.

Gene Summary

Adenine Count

1212776 bp

Thymine Count

1206788 bp

Guanine Count

1239673 bp

Cytosine Count

1239842 bp

Genome Length

4899277 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

298 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdFEK49_15810Not AvailableNegative3263441 - 326454440370.8
transcriptional regulator nrdrFEK49_15815Not AvailableNegative3264548 - 326499717259.9
duf3251 domain-containing proteinFEK49_15820Not AvailablePositive3265148 - 326569019708.9
nucleoside-specific channel-forming protein tsxFEK49_15825Not AvailablePositive3265988 - 326687233576.6
hnh nuclease family proteinFEK49_15830Not AvailableNegative3267089 - 326743613364.7
type ii toxin-antitoxin system rele/pare family toxinFEK49_15835Not AvailableNegative3267524 - 326780511048.2
type ii toxin-antitoxin system pard family antitoxinFEK49_15840Not AvailableNegative3267798 - 32680408997.73
protein translocase subunit secfFEK49_15845Not AvailableNegative3268193 - 326916435382.7
protein translocase subunit secdFEK49_15850Not AvailableNegative3269175 - 327102266604.2
preprotein translocase subunit yajcFEK49_15855Not AvailableNegative3271050 - 327138211887.9

Displaying genes 3191 – 3200 of 4708 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.