Tychonema bourrellyi FEM_GT703

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Tychonema

Description

Tychonema bourrellyi FEM_GT703 is a freshwater cyanobacterium predominantly found in Lake Garda. This species is characterized by having a single replicon, which suggests a streamlined genetic organization that may be advantageous in its specific ecological niche. The genetic material of T. bourrellyi is represented in the database with the accession number NXIB00000000.2, providing a reference point for further genetic and phylogenetic studies. The presence of Tychonema bourrellyi in Lake Garda highlights its potential role in the freshwater ecosystem, particularly in nutrient cycling and primary production. Cyanobacteria are known for their ability to perform photosynthesis, contributing to the oxygen levels in aquatic environments while also serving as a food source for various aquatic organisms. The specific adaptation of T. bourrellyi to freshwater habitats suggests that it may possess unique physiological traits that allow it to thrive in the conditions present in Lake Garda. Understanding the traits and ecological role of Tychonema bourrellyi can provide insights into the health of freshwater ecosystems and the dynamics of microbial communities. Monitoring such species is crucial, as they can be indicators of environmental changes and water quality.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusTychonema
SpeciesTychonema bourrellyi
StrainFEM_GT703

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; Lake Garda
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tychonema bourrellyi FEM_GT703 scaffold271_size2524, whole genome

Gene Summary

Adenine Count

1307719 bp

Thymine Count

1318543 bp

Guanine Count

1056454 bp

Cytosine Count

1056334 bp

Genome Length

4739110 bp

Protein-coding Genes

4328 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon dioxide-concentrating mechanism protein ccmkCP500_020270Not AvailableNegative4453071 - 445341212063.7
carbon dioxide-concentrating mechanism protein ccmkCP500_020275Not AvailableNegative4453510 - 445382110968.3
hypothetical proteinCP500_020280Not AvailablePositive4454548 - 445556738255.4
nad(p)h-quinone oxidoreductase subunit fCP500_020285Not AvailablePositive4455597 - 445747167855.2
uma2 family endonucleaseCP500_020290Not AvailableNegative4457537 - 445811221523.1
glycosyltransferaseCP500_020300Not AvailableNegative4459714 - 446047528872.0
hypothetical proteinCP500_020305Not AvailableNegative4460728 - 446209550042.4
dna-binding response regulatorCP500_020310Not AvailableNegative4462184 - 446284624729.0
diguanylate cyclaseCP500_020315Not AvailableNegative4462915 - 446426149564.8
phosphoribosylglycinamide formyltransferaseCP500_020320Not AvailableNegative4464585 - 446526824762.2

Displaying genes 3841 – 3850 of 4383 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.