Rhizobium sp. J15

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. J15 is a rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. It possesses a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation in its environment. The accession number for Rhizobium sp. J15 is NWSX00000000.1, which provides a unique identifier for its genomic data in biological databases. This identification is crucial for researchers studying the genomic features and evolutionary relationships of this species within the Rhizobium genus, which is known for its role in nitrogen fixation. Rhizobium species, including J15, are primarily recognized for their symbiotic relationships with leguminous plants, where they form root nodules and convert atmospheric nitrogen into a form that plants can utilize. This biological interaction is vital in agriculture, as it contributes to soil fertility and reduces the need for chemical fertilizers. The motility conferred by flagella may enhance the bacterium's ability to colonize host plants and establish effective symbiosis, thereby playing a significant role in nutrient cycling within ecosystems. Understanding the specific traits of Rhizobium sp. J15 can provide insights into its ecological functions and potential applications in sustainable agriculture practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. J15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. J15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. J15 Scaffold116_1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1276503 bp

Thymine Count

1277187 bp

Guanine Count

2049301 bp

Cytosine Count

2067812 bp

Genome Length

6670803 bp

Protein-coding Genes

6178 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid dehydrogenaseCO670_02605Not AvailablePositive559927 - 56117446289.5
gluconokinaseCO670_02610Not AvailableNegative561164 - 56170319225.6
dipeptide abc transporter atp-binding proteinCO670_02615Not AvailableNegative561730 - 56268334852.4
dipeptide abc transporter atp-binding protein dppdCO670_02620Not AvailableNegative562680 - 56369636718.0
dipeptide abc transporter permease dppcCO670_02625Not AvailableNegative563696 - 56458631710.8
peptide abc transporter permeaseCO670_02630Not AvailableNegative564596 - 56560036696.4
abc transporter substrate-binding proteinCO670_02635Not AvailableNegative565688 - 56728358595.3
iron-responsive transcriptional regulatorCO670_02640Not AvailableNegative567622 - 56810417567.4
methylmalonate-semialdehyde dehydrogenase (coa acylating)CO670_02645Not AvailableNegative568376 - 56987253554.6
antibiotic biosynthesis monooxygenaseCO670_02650Not AvailablePositive569994 - 57030811509.0

Displaying genes 591 – 600 of 6274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.