Rhizobium sp. J15

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. J15 is a rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. It possesses a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation in its environment. The accession number for Rhizobium sp. J15 is NWSX00000000.1, which provides a unique identifier for its genomic data in biological databases. This identification is crucial for researchers studying the genomic features and evolutionary relationships of this species within the Rhizobium genus, which is known for its role in nitrogen fixation. Rhizobium species, including J15, are primarily recognized for their symbiotic relationships with leguminous plants, where they form root nodules and convert atmospheric nitrogen into a form that plants can utilize. This biological interaction is vital in agriculture, as it contributes to soil fertility and reduces the need for chemical fertilizers. The motility conferred by flagella may enhance the bacterium's ability to colonize host plants and establish effective symbiosis, thereby playing a significant role in nutrient cycling within ecosystems. Understanding the specific traits of Rhizobium sp. J15 can provide insights into its ecological functions and potential applications in sustainable agriculture practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. J15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. J15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. J15 Scaffold116_1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1276503 bp

Thymine Count

1277187 bp

Guanine Count

2049301 bp

Cytosine Count

2067812 bp

Genome Length

6670803 bp

Protein-coding Genes

6178 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
calcium:proton antiporterCO670_30060Not AvailablePositive6176356 - 617748340574.2
duf4239 domain-containing proteinCO670_30065Not AvailablePositive6177631 - 617838326934.7
efflux transporter periplasmic adaptor subunitCO670_30070Not AvailablePositive6178688 - 617988442899.2
hydrophobe/amphiphile efflux-1 family rnd transporterCO670_30075Not AvailablePositive6179927 - 6183109113268.0
hypothetical proteinCO670_30080Not AvailableNegative6183118 - 618344712052.7
hypothetical proteinCO670_30085Not AvailableNegative6183444 - 618422928329.4
hypothetical proteinCO670_30090Not AvailableNegative6184435 - 618522926839.1
sugar abc transporter permeaseCO670_30095Not AvailableNegative6185513 - 618654436744.0
d-xylose abc transporter atp-binding proteinCO670_30100Not AvailableNegative6186586 - 618812754921.5
abc transporter substrate-binding proteinCO670_30105Not AvailableNegative6188206 - 618917134106.2

Displaying genes 5841 – 5850 of 6274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.