bacterium HR28

Kingdom

Phylum

Class

Order

Family

Genus

Description

Bacterium HR28 is characterized by having a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The organism is cataloged under the accession number BEIE00000000.1, which serves as a reference for its genomic sequences and associated data. The presence of one replicon suggests that HR28 could exhibit unique metabolic or growth characteristics compared to bacteria with multiple replicons. Bacteria with a single replicon often demonstrate a more straightforward regulatory mechanism for gene expression and replication, which can be advantageous in specific ecological niches. Understanding the genomic and biological traits of HR28 could provide insights into its ecological role and potential applications in biotechnology or environmental microbiology. The simplicity of its genomic structure might allow for easier manipulation in laboratory settings, paving the way for research into its metabolic functions or interactions with other microorganisms. Overall, the study of HR28 and its traits emphasizes the importance of genetic organization in microbial ecology, potentially influencing how this bacterium interacts with its environment and contributes to various ecological processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium HR28 DNA, contig: NODE_434_8, isolate: HRbin28, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2509 genes

Non-Coding Genes

342 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase/3'-5' exonuclease polxHRbin28_02044Not AvailableNegative2305234 - 230698865936.2
hypothetical proteinHRbin28_02045Not AvailableNegative2306994 - 230775829406.2
hypothetical proteinHRbin28_02046Not AvailableNegative2307980 - 230972864412.0
carbamate kinase 1HRbin28_02047Not AvailableNegative2309879 - 231082633725.7
hypothetical proteinHRbin28_02048Not AvailableNegative2310823 - 231227451902.4
succinate--coa ligaseHRbin28_02049Not AvailableNegative2312296 - 231384054416.6
hypothetical proteinHRbin28_02050Not AvailableNegative2314254 - 231514432083.9
6-hydroxypseudooxynicotine dehydrogenase complex subunit alphaHRbin28_02051Not AvailablePositive2315239 - 231612331525.9
caffeine dehydrogenase subunit gammaHRbin28_02052Not AvailablePositive2316120 - 231661417958.7
caffeine dehydrogenase subunit alphaHRbin28_02053Not AvailablePositive2316632 - 231900486863.3

Displaying genes 2041 – 2050 of 2851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.