bacterium HR10

Kingdom

Phylum

Class

Order

Family

Genus

Description

Bacterium HR10 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in replication. This trait can impact its growth dynamics and evolutionary potential, as a single replicon often suggests simpler regulatory mechanisms compared to organisms with multiple replicons. The genomic data for HR10 can be referenced under the accession number BEHM00000000.1, providing a unique identifier for researchers interested in further exploring its genetic makeup and potential applications. The streamlined nature of its genome could facilitate easier manipulation for biotechnological purposes, although specific applications or functionalities of HR10 are not detailed in the available information. In a broader ecological context, the presence of bacteria like HR10 with a single replicon could suggest a niche adaptation, possibly allowing it to thrive in specific environments where rapid growth and resource utilization are critical. This trait may be advantageous in competitive microbial communities, where efficient replication can ensure survival and dominance. Understanding such traits in bacteria can provide insights into microbial ecology, evolution, and potential roles in biogeochemical cycles. Further research is necessary to elucidate the specific ecological roles and interactions of HR10 within its natural habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium HR10 DNA, contig: NODE_9388_118, isolate: HRbin10, whole

Gene Summary

Adenine Count

568074 bp

Thymine Count

567227 bp

Guanine Count

1001487 bp

Cytosine Count

995170 bp

Genome Length

3131958 bp

Protein-coding Genes

2687 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-d-manno-octulosonic acid transferaseHRbin10_01040Not AvailableNegative1208979 - 121030149667.6
pyruvate, phosphate dikinaseHRbin10_01041Not AvailableNegative1210355 - 1213066100408.0
dna repair protein recoHRbin10_01042Not AvailableNegative1213142 - 121389428036.1
Trna-pheNot AvailableNot AvailablePositive1213995 - 1214070Not Available
phosphoribosylformylglycinamidine synthase subunit purlHRbin10_01044Not AvailableNegative1214255 - 121648680774.4
elongation factor pHRbin10_01045Not AvailablePositive1216613 - 121717321072.4
lipopolysaccharide export system permease protein lptfHRbin10_01046Not AvailableNegative1217179 - 121974996205.5
octanoyltransferaseHRbin10_01047Not AvailableNegative1219746 - 122087642025.8
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complexHRbin10_01048Not AvailableNegative1221035 - 122242951167.1
2-oxoisovalerate dehydrogenase subunit betaHRbin10_01049Not AvailableNegative1222482 - 122345635989.3

Displaying genes 1041 – 1050 of 2733 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

12 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da

Displaying 1–10 of 12 metabolites

Health Effects

No health effects information available for this bacterium.