Serratia oryzae str. J11-6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia oryzae str. J11-6 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This species has a single replicon, indicating a streamlined genetic structure that can facilitate efficient replication and adaptation in its environment. One notable host for Serratia oryzae str. J11-6 is Aedes albopictus, commonly known as the Asian tiger mosquito. This association suggests a potential ecological role for the bacterium in the context of mosquito biology, possibly influencing microbial community dynamics within the mosquito or affecting the mosquito's interactions with its environment. The accession number for Serratia oryzae str. J11-6 is MOXD00000000.1, which provides a reference for genetic and genomic studies. Understanding the traits of this bacterium, especially its motility and host association, can shed light on its ecological interactions and potential applications in biocontrol or other biotechnological fields. Further research could explore the specific roles that Serratia oryzae str. J11-6 plays in the lifecycle of Aedes albopictus and its implications for vector-borne diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia oryzae
StrainJ11-6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia oryzae str. J11-6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Aedes albopictus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia oryzae strain J11-6 NODE_96_length_228_cov_285.594, whole

Gene Summary

Adenine Count

1169101 bp

Thymine Count

1176236 bp

Guanine Count

1337213 bp

Cytosine Count

1329462 bp

Genome Length

5012778 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseBMI79_18840Not AvailableNegative4253379 - 425456341336.9
xylose abc transporter atp-binding proteinBMI79_18845Not AvailableNegative4254541 - 425608256392.1
d-xylose abc transporter substrate-binding proteinBMI79_18850Not AvailableNegative4256110 - 425710535725.0
xylose isomeraseBMI79_18855Not AvailablePositive4257423 - 425874249344.2
xylulokinaseBMI79_18860Not AvailablePositive4259277 - 426072852307.7
hydrolaseBMI79_18865Not AvailablePositive4260844 - 426139520602.6
arac family transcriptional regulatorBMI79_18870Not AvailablePositive4261398 - 426231233484.4
multidrug transporter mdfaBMI79_18875Not AvailablePositive4262456 - 426369744069.3
selenocysteinyl-trna-specific translation elongation factor selbBMI79_18880Not AvailableNegative4264226 - 426606766801.6
l-seryl-trna(sec) selenium transferaseBMI79_18885Not AvailableNegative4266064 - 426745550454.4

Displaying genes 3751 – 3760 of 4381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.