Serratia oryzae str. J11-6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia oryzae str. J11-6 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This species has a single replicon, indicating a streamlined genetic structure that can facilitate efficient replication and adaptation in its environment. One notable host for Serratia oryzae str. J11-6 is Aedes albopictus, commonly known as the Asian tiger mosquito. This association suggests a potential ecological role for the bacterium in the context of mosquito biology, possibly influencing microbial community dynamics within the mosquito or affecting the mosquito's interactions with its environment. The accession number for Serratia oryzae str. J11-6 is MOXD00000000.1, which provides a reference for genetic and genomic studies. Understanding the traits of this bacterium, especially its motility and host association, can shed light on its ecological interactions and potential applications in biocontrol or other biotechnological fields. Further research could explore the specific roles that Serratia oryzae str. J11-6 plays in the lifecycle of Aedes albopictus and its implications for vector-borne diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia oryzae
StrainJ11-6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia oryzae str. J11-6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Aedes albopictus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia oryzae strain J11-6 NODE_96_length_228_cov_285.594, whole

Gene Summary

Adenine Count

1169101 bp

Thymine Count

1176236 bp

Guanine Count

1337213 bp

Cytosine Count

1329462 bp

Genome Length

5012778 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidine phosphorylaseBMI79_12940Not AvailableNegative2913985 - 291530746706.6
deoxyribose-phosphate aldolaseBMI79_12945Not AvailableNegative2915365 - 291614427742.3
nucleoside transporter nupcBMI79_12950Not AvailableNegative2916676 - 291795344379.6
metal-dependent hydrolaseBMI79_12955Not AvailableNegative2918133 - 291891528885.8
patatin family proteinBMI79_12960Not AvailableNegative2918912 - 292002141120.5
stress-response proteinBMI79_12965Not AvailableNegative2920032 - 29202177015.08
duf1328 domain-containing proteinBMI79_12970Not AvailableNegative2920278 - 29204395725.42
molecular chaperone osmyBMI79_12975Not AvailableNegative2920506 - 292112021094.1
peptide chain release factor 3BMI79_12980Not AvailableNegative2921652 - 292324159594.6
ribosomal-protein-alanine n-acetyltransferaseBMI79_12985Not AvailableNegative2923392 - 292383516239.4

Displaying genes 2581 – 2590 of 4381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.