Serratia oryzae str. J11-6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia oryzae str. J11-6 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This species has a single replicon, indicating a streamlined genetic structure that can facilitate efficient replication and adaptation in its environment. One notable host for Serratia oryzae str. J11-6 is Aedes albopictus, commonly known as the Asian tiger mosquito. This association suggests a potential ecological role for the bacterium in the context of mosquito biology, possibly influencing microbial community dynamics within the mosquito or affecting the mosquito's interactions with its environment. The accession number for Serratia oryzae str. J11-6 is MOXD00000000.1, which provides a reference for genetic and genomic studies. Understanding the traits of this bacterium, especially its motility and host association, can shed light on its ecological interactions and potential applications in biocontrol or other biotechnological fields. Further research could explore the specific roles that Serratia oryzae str. J11-6 plays in the lifecycle of Aedes albopictus and its implications for vector-borne diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia oryzae
StrainJ11-6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia oryzae str. J11-6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Aedes albopictus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia oryzae strain J11-6 NODE_96_length_228_cov_285.594, whole

Gene Summary

Adenine Count

1169101 bp

Thymine Count

1176236 bp

Guanine Count

1337213 bp

Cytosine Count

1329462 bp

Genome Length

5012778 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine/glutathione abc transporter permease/atp-binding protein cyddBMI79_11150Not AvailablePositive2517921 - 251968765152.4
cysteine/glutathione abc transporter atp-binding protein/permease cydcBMI79_11155Not AvailablePositive2519690 - 252142662739.9
leucyl/phenylalanyl-trna--protein transferaseBMI79_11160Not AvailablePositive2521457 - 252218226721.1
translation initiation factor if-1BMI79_11165Not AvailablePositive2522289 - 25225078236.07
atp-dependent clp protease atp-binding subunit clpaBMI79_11170Not AvailableNegative2522709 - 252498884304.1
atp-dependent clp protease adapter clpsBMI79_11175Not AvailableNegative2525158 - 252547812359.8
cold shock domain protein cspdBMI79_11180Not AvailablePositive2525824 - 25260458002.52
macrolide abc transporter permease/atp-binding protein macbBMI79_11185Not AvailableNegative2526123 - 252806969945.4
macrolide transporter subunit macaBMI79_11190Not AvailableNegative2528069 - 252918140518.1
hypothetical proteinBMI79_11195Not AvailablePositive2529384 - 253034336199.3

Displaying genes 2281 – 2290 of 4381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.