SAR86 cluster bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

The SAR86 cluster bacterium is characterized by its possession of two replicons, which are essential for its genetic and metabolic functions. The specific genomic data for this organism can be found under the accessions NVWI00000000.1 and NVVJ00000000.1. The SAR86 cluster is known to thrive in marine environments, particularly in oceanic waters, where it plays a significant role in the microbial community. Members of this cluster are often associated with the degradation of organic matter, contributing to nutrient cycling in aquatic ecosystems. Their metabolic capabilities are likely adapted to the oligotrophic conditions typical of open ocean waters, where they may utilize a variety of substrates. Understanding the genomic features of the SAR86 cluster bacterium, including its two replicons, can provide insights into its evolutionary adaptations and ecological functions. The presence of multiple replicons may suggest a complex regulatory mechanism that allows for efficient adaptation to fluctuating environmental conditions. This adaptability is critical for survival in the diverse and often challenging marine habitats where these bacteria are found. In summary, the SAR86 cluster bacterium exemplifies the intricate relationships within marine microbial communities and highlights the importance of microbial processes in oceanic nutrient cycling. Its genomic characteristics facilitate its role in these ecosystems, making it a key player in maintaining the health and balance of marine environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: SAR86 cluster bacterium isolate NORP41

Gene Summary

Adenine Count

904582 bp

Thymine Count

897491 bp

Guanine Count

652427 bp

Cytosine Count

672138 bp

Genome Length

3128113 bp

Protein-coding Genes

2864 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
capsule biosynthesis protein capdCOA96_17220Not AvailableNegative3620063 - 362118441390.8
epimeraseCOA96_17225Not AvailableNegative3621181 - 362216735509.2
nad-dependent dehydrataseCOA96_17230Not AvailableNegative3622164 - 362335445173.8
lps o-antigen length regulatorCOA96_17235Not AvailableNegative3623602 - 362457636112.2
hypothetical proteinCOA96_17240Not AvailableNegative3624578 - 3627406101897.0
marr family eps-associated transcriptional regulatorCOA96_17245Not AvailableNegative3627518 - 362783212047.6
transcription/translation regulatory transformer protein rfahCOA96_17250Not AvailableNegative3627898 - 362846721733.9
pin domain nucleaseCOA96_17255Not AvailableNegative3628738 - 362911214212.2
hypothetical proteinCOA96_17260Not AvailableNegative3629112 - 36293458494.35
Trna-serNot AvailableNot AvailablePositive3629478 - 3629565Not Available

Displaying genes 6321 – 6330 of 6560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.