SAR86 cluster bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

The SAR86 cluster bacterium is characterized by its possession of two replicons, which are essential for its genetic and metabolic functions. The specific genomic data for this organism can be found under the accessions NVWI00000000.1 and NVVJ00000000.1. The SAR86 cluster is known to thrive in marine environments, particularly in oceanic waters, where it plays a significant role in the microbial community. Members of this cluster are often associated with the degradation of organic matter, contributing to nutrient cycling in aquatic ecosystems. Their metabolic capabilities are likely adapted to the oligotrophic conditions typical of open ocean waters, where they may utilize a variety of substrates. Understanding the genomic features of the SAR86 cluster bacterium, including its two replicons, can provide insights into its evolutionary adaptations and ecological functions. The presence of multiple replicons may suggest a complex regulatory mechanism that allows for efficient adaptation to fluctuating environmental conditions. This adaptability is critical for survival in the diverse and often challenging marine habitats where these bacteria are found. In summary, the SAR86 cluster bacterium exemplifies the intricate relationships within marine microbial communities and highlights the importance of microbial processes in oceanic nutrient cycling. Its genomic characteristics facilitate its role in these ecosystems, making it a key player in maintaining the health and balance of marine environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: SAR86 cluster bacterium isolate NORP41

Gene Summary

Adenine Count

904582 bp

Thymine Count

897491 bp

Guanine Count

652427 bp

Cytosine Count

672138 bp

Genome Length

3128113 bp

Protein-coding Genes

2864 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bb3-type cytochrome oxidase subunit ivCOA96_02400Not AvailablePositive526562 - 52723925459.2
cytochrome c oxidase subunit ivCOA96_02405Not AvailablePositive527252 - 52763814299.7
shikimate dehydrogenaseCOA96_02410Not AvailableNegative527714 - 52854729953.7
oxygen-dependent coproporphyrinogen oxidaseCOA96_02415Not AvailableNegative528552 - 52946334867.8
trna threonylcarbamoyladenosine biosynthesis protein rimnCOA96_02420Not AvailableNegative529502 - 53005920417.8
5-(carboxyamino)imidazole ribonucleotide mutaseCOA96_02425Not AvailableNegative530082 - 53058517134.7
dna-protecting protein dpraCOA96_02430Not AvailableNegative530697 - 53181840890.9
hypothetical proteinCOA96_02435Not AvailableNegative531920 - 53301740791.7
peptide deformylaseCOA96_02440Not AvailablePositive533128 - 53363418913.6
methionyl-trna formyltransferaseCOA96_02445Not AvailablePositive533641 - 53460635041.1

Displaying genes 3431 – 3440 of 6560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.